Evidence map›Paper›PMID 39060390›Full record

ArticleNature chemical biology2025

Restoring susceptibility to β-lactam antibiotics in methicillin-resistant Staphylococcus aureus.

Van T Nguyen, Biruk T Birhanu, Vega Miguel-Ruano, Choon Kim, Mayte Batuecas, Jingdong Yang, Amr M El-Araby, Eva Jiménez-Faraco, Valerie A Schroeder, Alejandra Alba and 9 more

Abstract read
In one paragraph

Article in Nature chemical biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Outer Membrane-Peptidoglycan Anchoring inJournal of the American Chemical Society · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Overcoming Methicillin-ResistantResearch (Washington, D.C.) · 2026
    Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Forced rewiring of RTK signaling.Nature chemical biology · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors.

Van T NguyenDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN, USA.ORCID 0000-0003-3070-7683
Biruk T Birhanu *Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN, USA.ORCID 0000-0002-5261-8406
Vega Miguel-Ruano *Department of Crystallography and Structural Biology, Instituto de Química-Física 'Blas Cabrera', Consejo Superior de Investigaciones Científicas, Madrid, Spain.
Choon KimDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN, USA.
Mayte BatuecasDepartment of Crystallography and Structural Biology, Instituto de Química-Física 'Blas Cabrera', Consejo Superior de Investigaciones Científicas, Madrid, Spain.
Jingdong YangDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN, USA.ORCID 0009-0008-1303-9007
Amr M El-ArabyDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN, USA.ORCID 0000-0002-3143-8801
Eva Jiménez-FaracoDepartment of Crystallography and Structural Biology, Instituto de Química-Física 'Blas Cabrera', Consejo Superior de Investigaciones Científicas, Madrid, Spain.
Valerie A SchroederDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN, USA.
Alejandra AlbaDepartment of Crystallography and Structural Biology, Instituto de Química-Física 'Blas Cabrera', Consejo Superior de Investigaciones Científicas, Madrid, Spain.
Neha RanaDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN, USA.
Safaa SaderDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN, USA.
Caitlyn A ThomasDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN, USA.
Rhona FeltzerDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN, USA.
Mijoon LeeDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN, USA.ORCID 0000-0001-7432-0427
Jed F FisherDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN, USA.
Juan A HermosoDepartment of Crystallography and Structural Biology, Instituto de Química-Física 'Blas Cabrera', Consejo Superior de Investigaciones Científicas, Madrid, Spain.ORCID 0000-0002-1862-8950
Mayland ChangDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN, USA.ORCID 0000-0002-4333-3775
Shahriar MobasheryDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN, USA. mobashery@nd.edu.ORCID 0000-0002-7695-7883

Funding

Inducible Antibiotic Resistance in Methicillin-Resistant Staphylococcus AureusR01AI104987 · NIAID · UNIVERSITY OF NOTRE DAME · PI Shahriar Mobashery · 2013 to 2026
$7.3M
Chemistry-Biochemistry-Biology Interface (CBBI) Program at Notre DameT32GM145773 · NIGMS · UNIVERSITY OF NOTRE DAME · PI Christian Corey Melander · 2022 to 2026
$1.5M
NIAID NIH HHS R01 AI104987NIGMS NIH HHS T32 GM145773Swiss National Science Foundation | National Center of Competence in Research Affective Sciences - Emotions in Individual Behaviour and Social Processes (National Centre of Competence in Research Affective Sciences) CRSII5_198737/1, SINERGIAU.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) AI104987
6 · The paper itself

Abstract

Infections by Staphylococcus aureus have been treated historically with β-lactam antibiotics. However, these antibiotics have become obsolete in methicillin-resistant S. aureus by acquisition of the bla and mec operons. The presence of the β-lactam antibiotic is detected by the sensor domains of BlaR and/or MecR, and the information is transmitted to the cytoplasm, resulting in derepression of the antibiotic-resistance genes. We hypothesized that inhibition of the sensor domain would shut down this response system, and β-lactam susceptibility would be restored. An in silico search of 11 million compounds led to a benzimidazole-based hit and, ultimately, to the boronate 4. The X-ray structure of 4 is covalently engaged with the active-site serine of BlaR. Compound 4 potentiates by 16- to 4,096-fold the activities of oxacillin and of meropenem against methicillin-resistant S. aureus strains. The combination of 4 with oxacillin or meropenem shows efficacy in infected mice, validating the strategy.

Indexed as

Anti-Bacterial Agentsbeta-LactamsMethicillin-Resistant Staphylococcus aureusAnimalsBenzimidazolesbeta Lactam AntibioticsHumansMeropenemMiceMicrobial Sensitivity TestsOxacillinStaphylococcal InfectionsAnti-Bacterial AgentsBenzimidazolesbeta Lactam Antibioticsbeta-LactamsMeropenemOxacillin

Identifiers

PMID39060390
PMCPMC12704196

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.