ArticleScientific data2024
Chromosome-scale assembly of the wild cereal relative Elymus sibiricus.
Article in Scientific data, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.
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Who cites it
8 citing papers in PubMed.
- Genome-wide identification and expression analysis of the GRAS transcription factor family and its expression profiles in Elymus sibiricus.BMC genomics · 2026Article
- Review
- Elevation-dependent productivity trade-offs in wildFrontiers in plant science · 2026Article
- Genome-wide identification and expression analysis of the SPL transcription factor family and its expression characteristics in Elymus sibiricus.BMC plant biology · 2025Article
- Forage Crop Research in the Modern Age.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025Review
- Characterization of a New Stripe Rust Resistance Gene on Chromosome 2StS fromPlants (Basel, Switzerland) · 2025Article
- Analysis of allohexaploid wheatgrass genome reveals its Y haplome origin in Triticeae and high-altitude adaptation.Nature communications · 2025Article
- Chromosome-scale assembly of the wild cereal relative Elymus sibiricus.Scientific data · 2024Article
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Authors and funding
7 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Elymus species, belonging to Triticeae tribe, is a tertiary gene pool for improvement of major cereal crops. Elymus sibiricus, a tetraploid with StH genome, is a typical species in the genus Elymus, which is widely utilized as a high-quality perennial forage grass in template regions. In this study, we report the construction of a chromosome-scale reference assembly of E. sibiricus line Gaomu No. 1 based on PacBio HiFi reads and chromosome conformation capture. Subgenome St and H were well phased by assisting with kmer and subgenome-specific repetitive sequence. The total assembly size was 6.929 Gb with a contig N50 of 49.518 Mb. In total, 89,800 protein-coding genes were predicted. The repetitive sequences accounted for 82.49% of the genome in E. sibiricus. Comparative genome analysis confirmed a major species-specific 4H/6H reciprocal translocation in E. sibiricus. The E. sibiricus assembly will be much helpful to exploit genetic resource of StH species in genus Elymus, and provides an important tool for E. sibiricus domestication.
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