Evidence map›Paper›PMID 39060305›Full record

ArticleNature communications2024

AGILE platform: a deep learning powered approach to accelerate LNP development for mRNA delivery.

Yue Xu, Shihao Ma, Haotian Cui, Jingan Chen, Shufen Xu, Fanglin Gong, Alex Golubovic, Muye Zhou, Kevin Chang Wang, Andrew Varley and 3 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 121 papers.

0numbers the graph read from it
0cells of the map it votes in
121citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

121 citing papers in PubMed.

  1. Review
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  7. Towards mRNA therapeutics 2.0.Nature reviews. Drug discovery · 2026
    Review
  8. Review
  9. Article
  10. Review
  11. New approach methodologies (NAMs) for preclinical and translational evaluation of mRNA-lipid nanoparticle (LNP) therapeutics.Journal of controlled release : official journal of the Controlled Release Society · 2026
    Review
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  13. Review
  14. Article
  15. Review
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  18. Article
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  20. Article

61 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Yue Xu *Leslie Dan Faculty of Pharmacy, University of Toronto, Toronto, ON, Canada.
Shihao Ma *Department of Computer Science, University of Toronto, Toronto, ON, Canada.
Haotian Cui *Department of Computer Science, University of Toronto, Toronto, ON, Canada.ORCID http://orcid.org/0000-0001-8119-9485
Jingan ChenLeslie Dan Faculty of Pharmacy, University of Toronto, Toronto, ON, Canada.ORCID http://orcid.org/0009-0002-5105-102X
Shufen XuLeslie Dan Faculty of Pharmacy, University of Toronto, Toronto, ON, Canada.
Fanglin GongLeslie Dan Faculty of Pharmacy, University of Toronto, Toronto, ON, Canada.
Alex GolubovicLeslie Dan Faculty of Pharmacy, University of Toronto, Toronto, ON, Canada.
Muye ZhouLeslie Dan Faculty of Pharmacy, University of Toronto, Toronto, ON, Canada.
Kevin Chang WangLeslie Dan Faculty of Pharmacy, University of Toronto, Toronto, ON, Canada.ORCID http://orcid.org/0000-0003-3017-0257
Andrew VarleyLeslie Dan Faculty of Pharmacy, University of Toronto, Toronto, ON, Canada.ORCID http://orcid.org/0000-0002-1518-2703
Rick Xing Ze LuLeslie Dan Faculty of Pharmacy, University of Toronto, Toronto, ON, Canada.
Bo WangDepartment of Computer Science, University of Toronto, Toronto, ON, Canada. bowang@vectorinstitute.ai.ORCID http://orcid.org/0000-0002-9620-3413
Bowen LiLeslie Dan Faculty of Pharmacy, University of Toronto, Toronto, ON, Canada. bw.li@utoronto.ca.ORCID http://orcid.org/0000-0001-5006-9143

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ionizable lipid nanoparticles (LNPs) are seeing widespread use in mRNA delivery, notably in SARS-CoV-2 mRNA vaccines. However, the expansion of mRNA therapies beyond COVID-19 is impeded by the absence of LNPs tailored for diverse cell types. In this study, we present the AI-Guided Ionizable Lipid Engineering (AGILE) platform, a synergistic combination of deep learning and combinatorial chemistry. AGILE streamlines ionizable lipid development with efficient library design, in silico lipid screening via deep neural networks, and adaptability to diverse cell lines. Using AGILE, we rapidly design, synthesize, and evaluate ionizable lipids for mRNA delivery, selecting from a vast library. Intriguingly, AGILE reveals cell-specific preferences for ionizable lipids, indicating tailoring for optimal delivery to varying cell types. These highlight AGILE's potential in expediting the development of customized LNPs, addressing the complex needs of mRNA delivery in clinical practice, thereby broadening the scope and efficacy of mRNA therapies.

Indexed as

COVID-19Deep LearningNanoparticlesRNA, MessengerSARS-CoV-2Cell LineCombinatorial Chemistry TechniquesCOVID-19 VaccinesGene Transfer TechniquesHumansLipidsLiposomesmRNA VaccinesCOVID-19 VaccinesLipid NanoparticlesLipidsLiposomesmRNA VaccinesRNA, Messenger

Identifiers

PMID39060305
PMCPMC11282250

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.