Evidence map›Paper›PMID 39060266›Full record

ArticleNature communications2024

Genome of the early spider-orchid Ophrys sphegodes provides insights into sexual deception and pollinator adaptation.

Alessia Russo, Mattia Alessandrini, Moaine El Baidouri, Daniel Frei, Teresa Rosa Galise, Lara Gaidusch, Hannah F Oertel, Sara E Garcia Morales, Giacomo Potente, Qin Tian and 10 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
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  4. Orchid genome evolution and trait innovation.Journal of integrative plant biology · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Alessia RussoDepartment of Plant Evolutionary Biology, Institute of Biology, University of Hohenheim, Stuttgart, Germany. alessia.russo@botinst.uzh.ch.ORCID 0000-0003-3856-5317
Mattia AlessandriniDepartment of Plant Evolutionary Biology, Institute of Biology, University of Hohenheim, Stuttgart, Germany.
Moaine El BaidouriUniversité Perpignan Via Domitia, Laboratoire Génome et Développement des Plantes, UMR5096, Perpignan, France.ORCID 0000-0002-5023-3457
Daniel FreiDepartment of Methods Development and Analytics, Agroscope, Wädenswil, Switzerland.ORCID 0009-0001-3191-7140
Teresa Rosa GaliseDepartment of Biology, University of Naples Federico II, Naples, Italy.ORCID 0000-0002-6922-9669
Lara GaiduschDepartment of Plant Evolutionary Biology, Institute of Biology, University of Hohenheim, Stuttgart, Germany.
Hannah F OertelDepartment of Plant Evolutionary Biology, Institute of Biology, University of Hohenheim, Stuttgart, Germany.ORCID 0009-0005-4241-1232
Sara E Garcia MoralesDepartment of Plant Evolutionary Biology, Institute of Biology, University of Hohenheim, Stuttgart, Germany.ORCID 0009-0007-9076-2138
Giacomo PotenteDepartment of Systematic and Evolutionary Botany and Zürich-Basel Plant Science Centre, University of Zurich, Zürich, Switzerland.ORCID 0000-0002-4343-3952
Qin TianNaturalis Biodiversity Centre, Leiden, The Netherlands.ORCID 0000-0002-7939-5329
Dmitry SmetaninDepartment of Plant and Microbial Biology and Zürich-Basel Plant Science Centre, University of Zurich, Zürich, Switzerland.
Joris A M BertrandUniversité Perpignan Via Domitia, Laboratoire Génome et Développement des Plantes, UMR5096, Perpignan, France.
Renske E OnsteinNaturalis Biodiversity Centre, Leiden, The Netherlands.ORCID 0000-0002-2295-3510
Olivier PanaudUniversité Perpignan Via Domitia, Laboratoire Génome et Développement des Plantes, UMR5096, Perpignan, France.ORCID 0000-0002-9292-503X
Jürg E FreyDepartment of Methods Development and Analytics, Agroscope, Wädenswil, Switzerland.ORCID 0000-0001-7377-2931
Salvatore CozzolinoDepartment of Biology, University of Naples Federico II, Naples, Italy.
Thomas WickerDepartment of Plant and Microbial Biology and Zürich-Basel Plant Science Centre, University of Zurich, Zürich, Switzerland.ORCID 0000-0002-6777-7135
Shuqing XuInstitute of Organismic and Molecular Evolution, University of Mainz, Mainz, Germany.ORCID 0000-0001-7010-4604
Ueli GrossniklausDepartment of Plant and Microbial Biology and Zürich-Basel Plant Science Centre, University of Zurich, Zürich, Switzerland.ORCID 0000-0002-0522-8974
Philipp M SchlüterDepartment of Plant Evolutionary Biology, Institute of Biology, University of Hohenheim, Stuttgart, Germany. philipp.schlueter@uni-hohenheim.de.ORCID 0000-0002-6057-0908

Funding

Deutsche Forschungsgemeinschaft (German Research Foundation) 446145319Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (Swiss National Science Foundation) 31003A_155943Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (Swiss National Science Foundation) IZLRZ3_163885Universität Zürich (University of Zurich) University Research Priority Program "Evolution in Action: from Genomes to Ecosystems"
6 · The paper itself

Abstract

Pollinator-driven evolution of floral traits is thought to be a major driver of angiosperm speciation and diversification. Ophrys orchids mimic female insects to lure male pollinators into pseudocopulation. This strategy, called sexual deception, is species-specific, thereby providing strong premating reproductive isolation. Identifying the genomic architecture underlying pollinator adaptation and speciation may shed light on the mechanisms of angiosperm diversification. Here, we report the 5.2 Gb chromosome-scale genome sequence of Ophrys sphegodes. We find evidence for transposable element expansion that preceded the radiation of the O. sphegodes group, and for gene duplication having contributed to the evolution of chemical mimicry. We report a highly differentiated genomic candidate region for pollinator-mediated evolution on chromosome 2. The Ophrys genome will prove useful for investigations into the repeated evolution of sexual deception, pollinator adaptation and the genomic architectures that facilitate evolutionary radiations.

Indexed as

OrchidaceaePollinationSpidersAdaptation, PhysiologicalAnimalsBiological EvolutionDNA Transposable ElementsEvolution, MolecularFemaleFlowersGene DuplicationGenome, PlantMalePhylogenyReproductive IsolationDNA Transposable Elements

Identifiers

PMID39060266
PMCPMC11282089

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.