Evidence map›Paper›PMID 39055239›Full record

ArticleCurrent infectious disease reports2023

Next Steps: Studying Diabetic Foot Infections with Next-Generation Molecular Assays.

Caitlin Sande, Zoë J Boston, Lindsay R Kalan, Meghan B Brennan

Abstract read
In one paragraph

Article in Current infectious disease reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Caitlin SandeDepartment of Biochemistry and Biomedical Sciences, Health Sciences Centre, McMaster University, Room 4H41, 1200 Main St West, Hamilton, ON L8N 3Z5, Canada.
Zoë J BostonDepartment of Medicine, School of Medicine and Public Health, University of Wisconsin, 1685 Highland Ave, Madison, WI 53583, USA.
Lindsay R KalanDepartment of Biochemistry and Biomedical Sciences, Health Sciences Centre, McMaster University, Room 4H41, 1200 Main St West, Hamilton, ON L8N 3Z5, Canada.
Meghan B BrennanDepartment of Medicine, School of Medicine and Public Health, University of Wisconsin, 1685 Highland Ave, Madison, WI 53583, USA.

Funding

Microbiome Based Biomarkers of Wound HealingR61DK133846 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI BRENNAN, MEGHAN, KALAN, LINDSAY ROBYN · 2022 to 2023
$1.0M
Crossing the divide: piloting an integrated care model to bridge rural-urban healthcare systems and reduce major amputations among rural patients with diabetic foot ulcersR01DK132569 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI BRENNAN, MEGHAN · 2022 to 2024
$921k
NIDDK NIH HHS R01 DK132569NIDDK NIH HHS R61 DK133846
6 · The paper itself

Abstract

Purpose of Review: In 2019, the International Working Group on the Diabetic Foot voiced six concerns regarding the use of molecular microbiology techniques for routine diagnosis of infection complicating diabetic foot ulcers. The purpose of this review is to evaluate contemporary evidence addressing each of these concerns and describe promising avenues for continued development of molecular microbiology assays. Recent Findings: Since 2019, the feasibility of conducting metagenomic and metatranscriptomic studies on diabetic foot ulcer samples has been shown. However, these preliminary studies used small samples with concerns for selection bias. We await larger-scale, longitudinal studies, potentially using the recently formed Diabetic Foot Consortium, to identify microbiome profiles associated with infection and patient outcomes. How these results would translate into a clinical diagnostic requires further clarification. Summary: High-throughput molecular microbiology techniques are not yet ready for clinical adoption as first-line diagnostics. However, moving from amplicon sequencing to metagenomic and metatranscriptomic studies has the potential to significantly accelerate development of assays that might meaningfully impact patient care.

Indexed as

Amplicon sequencingAmputationMetagenomicsMetatranscriptomicsMicrobiomeUlcer

Identifiers

PMID39055239
PMCPMC11270620

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.