Evidence map›Paper›PMID 39054354›Full record

ArticleNature structural & molecular biology2024

Structural basis for activity switching in polymerases determining the fate of let-7 pre-miRNAs.

Gangshun Yi, Mingda Ye, Loic Carrique, Afaf El-Sagheer, Tom Brown, Chris J Norbury, Peijun Zhang, Robert J C Gilbert

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Putting together pieces of the LIN28A pathway puzzle.Nature structural & molecular biology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Gangshun YiDivision of Structural Biology, Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford, UK.ORCID http://orcid.org/0009-0004-6509-4893
Mingda YeCentre for Medicines Discovery, University of Oxford, Oxford, UK.ORCID http://orcid.org/0000-0001-6324-4238
Loic CarriqueDivision of Structural Biology, Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford, UK.ORCID http://orcid.org/0000-0001-5332-8593
Afaf El-SagheerChemistry Research Laboratory, University of Oxford, Oxford, UK.ORCID http://orcid.org/0000-0001-8706-1292
Tom BrownChemistry Research Laboratory, University of Oxford, Oxford, UK.ORCID http://orcid.org/0000-0002-6538-3036
Chris J NorburySir William Dunn School of Pathology, University of Oxford, Oxford, UK.ORCID http://orcid.org/0000-0002-5811-4540
Peijun ZhangDivision of Structural Biology, Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford, UK.ORCID http://orcid.org/0000-0003-1803-691X
Robert J C GilbertDivision of Structural Biology, Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford, UK. robert.gilbert@magd.ox.ac.uk.ORCID http://orcid.org/0000-0001-9336-5604

Funding

Wellcome Trust
6 · The paper itself

Abstract

Tumor-suppressor let-7 pre-microRNAs (miRNAs) are regulated by terminal uridylyltransferases TUT7 and TUT4 that either promote let-7 maturation by adding a single uridine nucleotide to the pre-miRNA 3' end or mark them for degradation by the addition of multiple uridines. Oligo-uridylation is increased in cells by enhanced TUT7/4 expression and especially by the RNA-binding pluripotency factor LIN28A. Using cryogenic electron microscopy, we captured high-resolution structures of active forms of TUT7 alone, of TUT7 plus pre-miRNA and of both TUT7 and TUT4 bound with pre-miRNA and LIN28A. Our structures reveal that pre-miRNAs engage the enzymes in fundamentally different ways depending on the presence of LIN28A, which clamps them onto the TUTs to enable processive 3' oligo-uridylation. This study reveals the molecular basis for mono- versus oligo-uridylation by TUT7/4, as determined by the presence of LIN28A, and thus their mechanism of action in the regulation of cell fate and in cancer.

Indexed as

Cryoelectron MicroscopyMicroRNAsRNA-Binding ProteinsDNA-Binding ProteinsHumansModels, MolecularNucleotidyltransferasesProtein ConformationRNA NucleotidyltransferasesRNA PrecursorsDNA-Binding ProteinsLin28A protein, humanMicroRNAsmirnlet7 microRNA, humanNucleotidyltransferasesRNA-Binding ProteinsRNA NucleotidyltransferasesRNA PrecursorsTUT4 protein, humanTUT7 protein, human

Identifiers

PMID39054354
PMCPMC11402785

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.