Evidence map›Paper›PMID 39052788›Full record

ArticleScience (New York, N.Y.)2024

Selection for robust metabolism in domesticated yeasts is driven by adaptation to Hsp90 stress.

Natalia Condic, Hatim Amiji, Dipak Patel, William Charles Shropshire, Nejla Ozirmak Lermi, Youssef Sabha, Beryl John, Blake Hanson, Georgios Ioannis Karras

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Hsp90: Bringing it all together.Cell stress & chaperones · 2025
    Review
  10. Article
  11. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Natalia Condic *Department of Genetics, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0009-0001-6867-1930
Hatim Amiji *Department of Genetics, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0000-0002-6495-7835
Dipak Patel *Department of Genetics, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0000-0002-1384-729X
William Charles ShropshireCenter for Infectious Diseases, Department of Epidemiology, Human Genetics and Environmental Sciences, UTHealth Houston School of Public Health, McGovern Medical School, University of Texas Health Science Center, Houston, TX, USA.
Nejla Ozirmak LermiDepartment of Genetics, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0000-0001-6820-1456
Youssef SabhaDepartment of Genetics, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0009-0006-2823-7853
Beryl JohnDepartment of Genetics, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0000-0002-6262-7760
Blake HansonCenter for Infectious Diseases, Department of Epidemiology, Human Genetics and Environmental Sciences, UTHealth Houston School of Public Health, McGovern Medical School, University of Texas Health Science Center, Houston, TX, USA.ORCID 0000-0003-2949-7818
Georgios Ioannis KarrasDepartment of Genetics, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0000-0003-2933-1535

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI Suzanne AW Fuqua · 2007 to 2026
$73.9M
How HSP90 shapes genotype-phenotype relationships to alter treatment outcome in cancerK22CA222938 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI KARRAS, GEORGIOS · 2020 to 2022
$577k
BD Biosciences Special Order LSRIIS10RR024574 · NCRR · BAYLOR COLLEGE OF MEDICINE · PI LUMPKIN, ELLEN A · 2009 to 2009
$430k
NCI NIH HHS K22 CA222938NCI NIH HHS P30 CA125123NCRR NIH HHS S10 RR024574
6 · The paper itself

Abstract

Protein folding both promotes and constrains adaptive evolution. We uncover this surprising duality in the role of the protein-folding chaperone heat shock protein 90 (Hsp90) in maintaining the integrity of yeast metabolism amid proteotoxic stressors within industrial domestication niches. Ethanol disrupts critical Hsp90-dependent metabolic pathways and exerts strong selective pressure for redundant duplications of key genes within these pathways, yielding the classical genomic signatures of beer and bread domestication. This work demonstrates a mechanism of adaptive canalization in an ecology of major economic importance and highlights Hsp90-dependent variation as an important source of phantom heritability in complex traits.

Indexed as

Adaptation, PhysiologicalEthanolFermentationHSP90 Heat-Shock ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSelection, GeneticBeerBreadGene DuplicationMetabolic Networks and PathwaysProtein FoldingStress, PhysiologicalEthanolHSP82 protein, S cerevisiaeHSP90 Heat-Shock ProteinsSaccharomyces cerevisiae Proteins

Identifiers

PMID39052788
PMCPMC11410103

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.