Evidence map›Paper›PMID 39052387›Full record

ArticleJCI insight2024

The genomic landscape of lung cancer in never-smokers from the Women's Health Initiative.

Sitapriya Moorthi, Amy Paguirigan, Pushpa Itagi, Minjeong Ko, Mary Pettinger, Anna Ch Hoge, Anwesha Nag, Neil A Patel, Feinan Wu, Cassie Sather and 6 more

Abstract read
In one paragraph

Article in JCI insight, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Development and Characterization of a Patient-DerivedJTO clinical and research reports · 2026
    Article
  6. Article
  7. Article
  8. Article
  9. Current oncology (Toronto, Ont.) · 2026
    Review
  10. Article
  11. Review
  12. Review
  13. Review
  14. Sex-specific Risks in Lung Cancer-Associated Thrombosis: Focus on Female Patients.Clinical and applied thrombosis/hemostasis : official journal of the International Academy of Clinical and Applied Thrombosis/Hemostasis
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Sitapriya MoorthiHuman Biology Division.
Amy PaguiriganClinical Research Division, and.
Pushpa ItagiHuman Biology Division.
Minjeong KoPublic Health Sciences Division, Fred Hutchinson Cancer Center, Seattle, Washington, USA.
Mary PettingerPublic Health Sciences Division, Fred Hutchinson Cancer Center, Seattle, Washington, USA.
Anna Ch HogePublic Health Sciences Division, Fred Hutchinson Cancer Center, Seattle, Washington, USA.
Anwesha NagCenter for Cancer Genomics, Dana-Farber Cancer Institute, Boston, Massachusetts, USA.
Neil A PatelCenter for Cancer Genomics, Dana-Farber Cancer Institute, Boston, Massachusetts, USA.
Feinan WuGenomics and Bioinformatics Shared Resource, Fred Hutchinson Cancer Center, Seattle, Washington, USA.
Cassie SatherGenomics and Bioinformatics Shared Resource, Fred Hutchinson Cancer Center, Seattle, Washington, USA.
Kevin M LevineHuman Biology Division.
Matthew P FitzgibbonGenomics and Bioinformatics Shared Resource, Fred Hutchinson Cancer Center, Seattle, Washington, USA.
Aaron R ThornerCenter for Cancer Genomics, Dana-Farber Cancer Institute, Boston, Massachusetts, USA.
Garnet L AndersonPublic Health Sciences Division, Fred Hutchinson Cancer Center, Seattle, Washington, USA.
Gavin HaHuman Biology Division.
Alice H BergerHuman Biology Division.

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Eric Collisson · 1985 to 2026
$296.4M
TRAINING IN CANCER BIOLOGY &TRANSPLANTATIONT32CA009515 · NCI · UNIVERSITY OF WASHINGTON · PI NANCY ELLEN DAVIDSON, Effie W Petersdorf · 1985 to 2026
$16.2M
Understanding and exploiting novel therapeutic vulnerabilities of RIT1-driven lung cancerR37CA252050 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Alice Berger · 2021 to 2026
$3.1M
Computational and functional discovery of isoforms driving cancer and drug resistanceR01CA284585 · NCI · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI Alice Berger, Angela Norie Brooks · 2024 to 2026
$2.1M
Expanding the cancer paralog genetic interaction map to enable precision oncologyR01CA262556 · NCI · FRED HUTCHINSON CANCER CENTER · PI Alice Berger · 2024 to 2026
$1.6M
Identifying driver non-coding alterations in metastatic prostate cancer from tumor and cell-free DNAK22CA237746 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI HA, GAVIN · 2020 to 2022
$568k
NCI NIH HHS K22 CA237746NCI NIH HHS P30 CA015704NCI NIH HHS R01 CA262556NCI NIH HHS R01 CA284585NCI NIH HHS R37 CA252050NCI NIH HHS T32 CA009515
6 · The paper itself

Abstract

Over 200,000 individuals are diagnosed with lung cancer in the United States every year, with a growing proportion of cases, especially lung adenocarcinoma, occurring in individuals who have never smoked. Women over the age of 50 comprise the largest affected demographic. To understand the genomic drivers of lung adenocarcinoma and therapeutic response in this population, we performed whole genome and/or whole exome sequencing on 73 matched lung tumor/normal pairs from postmenopausal women who participated in the Women's Health Initiative. Somatic copy number alterations showed little variation by smoking status, suggesting that aneuploidy may be a general characteristic of lung cancer regardless of smoke exposure. Similarly, clock-like and APOBEC mutation signatures were prevalent but did not differ in tumors from smokers and never-smokers. However, mutations in both EGFR and KRAS showed unique allelic differences determined by smoking status that are known to alter tumor response to targeted therapy. Mutations in the MYC-network member MGA were more prevalent in tumors from smokers. Fusion events in ALK, RET, and ROS1 were absent, likely due to age-related differences in fusion prevalence. Our work underscores the profound effect of smoking status, age, and sex on the tumor mutational landscape and identifies areas of unmet medical need.

Indexed as

Lung NeoplasmsMutationAdenocarcinoma of LungAgedDNA Copy Number VariationsErbB ReceptorsExome SequencingFemaleGenomicsHumansMiddle AgedNon-SmokersProto-Oncogene Proteins p21(ras)SmokersSmokingUnited StatesEGFR protein, humanErbB ReceptorsKRAS protein, humanProto-Oncogene Proteins p21(ras)GeneticsGenetic variationLung cancerMolecular diagnosisTherapeutics

Identifiers

PMID39052387
PMCPMC11385083

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.