Evidence map›Paper›PMID 39052212›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2024

Quantitative Membrane Proteomics for Discovery of Actionable Drug Targets at the Surface of RAS-Driven Human Cancer Cells.

Xiaoying Ye

Abstract read
PubMed Publisher
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Xiaoying YeAnalytical Sciences, BioPharmaceuticals R&D, AstraZeneca, Gaithersburg, MD, USA. Xiaoying.Ye@astrazeneca.com.

Funding

NIH HHS HHSN261200800001E
6 · The paper itself

Abstract

With the advent of promising lung cancer immunotherapies targeting proteins at the cell surface of RAS-driven human cancers, the mass spectrometry (MS)-based surfaceomics remains a feasible strategy for therapeutic target discovery. This chapter describes a protocol for discovery of druggable protein targets at the surface of RAS-driven human cancer cells. This method relies on bottom-up MS-based quantitative surfaceomics that employs in parallel, targeted hydrazide-based cell-surface glycoproteomics and global shotgun membrane proteomics to enable unbiased quantitative profiling of thousands of cell surface membrane proteins. A large-scale molecular map of the KRAS

Indexed as

ProteomicsAntigens, CDAntigens, NeoplasmAntineoplastic AgentsBasiginCell Adhesion MoleculesCell Line, TumorCell MembraneDrug DiscoveryHumansMass SpectrometryMembrane ProteinsNeoplasm ProteinsNeoplasmsProto-Oncogene Proteins p21(ras)ras ProteinsAntigens, CDAntigens, NeoplasmAntineoplastic AgentsBasiginCDCP1 protein, humanCell Adhesion MoleculesKRAS protein, humanMembrane ProteinsNeoplasm ProteinsProto-Oncogene Proteins p21(ras)ras ProteinsAntibodiesCDCP1ImmunotherapyQuantitative MS-based surfaceomicsTheranostics

Identifiers

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.