Evidence map›Paper›PMID 39052053›Full record

ArticleAnalytical and bioanalytical chemistry2024

LC-MS/MS-based phospholipid profiling of plant-pathogenic bacteria with tailored separation of methyl-branched species.

Edward Rudt, Christian Faist, Vera Schwantes, Nele Konrad, Nina Wiedmaier-Czerny, Katja Lehnert, Shiri Topman-Rakover, Aya Brill, Saul Burdman, Zvi Hayouka and 2 more

Abstract read
In one paragraph

Article in Analytical and bioanalytical chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Edward RudtInstitute of Inorganic and Analytical Chemistry, University of Münster, Corrensstraße 48, D-48149, Münster, Germany.ORCID http://orcid.org/0000-0003-4351-3212
Christian FaistInstitute of Inorganic and Analytical Chemistry, University of Münster, Corrensstraße 48, D-48149, Münster, Germany.ORCID http://orcid.org/0009-0007-2453-3169
Vera SchwantesInstitute of Inorganic and Analytical Chemistry, University of Münster, Corrensstraße 48, D-48149, Münster, Germany.ORCID http://orcid.org/0009-0004-8400-5315
Nele KonradInstitute of Inorganic and Analytical Chemistry, University of Münster, Corrensstraße 48, D-48149, Münster, Germany.
Nina Wiedmaier-CzernyInstitute of Food Chemistry (170b) , University of Hohenheim, Garbenstraße 28, D-70593, Stuttgart, Germany.ORCID http://orcid.org/0000-0002-6658-3064
Katja LehnertInstitute of Food Chemistry (170b) , University of Hohenheim, Garbenstraße 28, D-70593, Stuttgart, Germany.ORCID http://orcid.org/0000-0003-4416-531X
Shiri Topman-RakoverInstitute of Biochemistry, Food Science and Nutrition, The Robert H. Smith Faculty of Agriculture, Food & Environment, The Hebrew University of Jerusalem, 76100, Rehovot, Israel.
Aya BrillInstitute of Biochemistry, Food Science and Nutrition, The Robert H. Smith Faculty of Agriculture, Food & Environment, The Hebrew University of Jerusalem, 76100, Rehovot, Israel.
Saul BurdmanDepartment of Plant Pathology and Microbiology, The Robert H. Smith Faculty of Agriculture, Food & Environment, The Hebrew University of Jerusalem, 76100, Rehovot, Israel.ORCID http://orcid.org/0000-0001-9544-7371
Zvi HayoukaInstitute of Biochemistry, Food Science and Nutrition, The Robert H. Smith Faculty of Agriculture, Food & Environment, The Hebrew University of Jerusalem, 76100, Rehovot, Israel.ORCID http://orcid.org/0000-0003-3582-4029
Walter VetterInstitute of Food Chemistry (170b) , University of Hohenheim, Garbenstraße 28, D-70593, Stuttgart, Germany.ORCID http://orcid.org/0000-0002-5592-4265
Heiko HayenInstitute of Inorganic and Analytical Chemistry, University of Münster, Corrensstraße 48, D-48149, Münster, Germany. heiko.hayen@uni-muenster.de.ORCID http://orcid.org/0000-0002-4074-8545

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant-pathogenic bacteria are one of the major constraints on agricultural yield. In order to selectively treat these bacteria, it is essential to understand the molecular structure of their cell membrane. Previous studies have focused on analyzing hydrolyzed fatty acids (FA) due to the complexity of bacterial membrane lipids. These studies have highlighted the occurrence of branched-chain fatty acids (BCFA) alongside normal-chain fatty acids (NCFA) in many bacteria. As several FA are bound in the intact phospholipids of the bacterial membrane, the presence of isomeric FA complicates lipid analysis. Furthermore, commercially available reference standards do not fully cover potential lipid isomers. To address this issue, we have developed a reversed-phase high-performance liquid chromatography (RP-HPLC) method with tandem mass spectrometry (MS/MS) to analyze the phospholipids of various plant-pathogenic bacteria with a focus on BCFA containing phospholipids. The study revealed the separation of three isomeric phosphatidylethanolamines (PE) depending on the number of bound BCFA to NCFA. The validation of the retention order was based on available reference standards in combination with the analysis of hydrolyzed fatty acids through gas chromatography with mass spectrometry (GC/MS) after fractionation. Additionally, the transferability of the retention order to other major lipid classes, such as phosphatidylglycerols (PG) and cardiolipins (CL), was thoroughly examined. Using the information regarding the retention behavior, the phospholipid profile of six plant-pathogenic bacteria was structurally elucidated. Furthermore, the developed LC-MS/MS method was used to classify the plant-pathogenic bacteria based on the number of bound BCFA in the phospholipidome.

Indexed as

PhospholipidsTandem Mass SpectrometryBacteriaChromatography, High Pressure LiquidChromatography, LiquidChromatography, Reverse-PhaseFatty AcidsLiquid Chromatography-Mass SpectrometryPlantsFatty AcidsPhospholipidsBranched-chain fatty acidGC/MSLC–MS/MSLipidomicsPhospholipidPlant-pathogenic bacteria

Identifiers

PMID39052053
PMCPMC11427607

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.