Evidence map›Paper›PMID 39050710›Full record

ArticleTurkish journal of biology = Turk biyoloji dergisi2024

LUNGBANK: a novel biorepository strategy tailored for comprehensive multiomics analysis and P-medicine applications in lung cancer.

Dilek Demircan Çeker, Volkan Baysungur, Serdar Evman, İlker Kolbaş, Abdurrahim Gördebil, Sinem M Nalbantoğlu, Yusuf Tambağ, Ömer Kaçar, Ahmet Midi, Hatice Aslanoğlu and 26 more

Abstract read
In one paragraph

Article in Turkish journal of biology = Turk biyoloji dergisi, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

36 authors.

Dilek Demircan ÇekerMolecular Oncology Laboratory, Medical Biotechnology Research Group, VPLS, TÜBİTAK Marmara Research Center, Kocaeli, Turkiye.ORCID https://orcid.org/0009-0005-2913-4410
Volkan BaysungurDepartment of Thoracic Surgery, Faculty of Medicine, University of Health Sciences, İstanbul, Turkiye.ORCID https://orcid.org/0000-0003-1053-1051
Serdar EvmanDepartment of Thoracic Surgery, Süreyyapaşa Training and Research Hospital, İstanbul, Turkiye.ORCID https://orcid.org/0000-0002-1672-966X
İlker KolbaşDepartment of Thoracic Surgery, Süreyyapaşa Training and Research Hospital, İstanbul, Turkiye.ORCID https://orcid.org/0000-0003-1656-9595
Abdurrahim GördebilDepartment of Thoracic Surgery, Süreyyapaşa Training and Research Hospital, İstanbul, Turkiye.ORCID https://orcid.org/0000-0002-4915-0830
Sinem M NalbantoğluMolecular Oncology Laboratory, Medical Biotechnology Research Group, VPLS, TÜBİTAK Marmara Research Center, Kocaeli, Turkiye.ORCID https://orcid.org/0000-0002-7067-6220
Yusuf TambağSoftware Technologies Research Institute, TÜBİTAK Informatics and Information Security Research Center, Ankara, Turkiye.ORCID https://orcid.org/0009-0005-6404-8630
Ömer KaçarMolecular Oncology Laboratory, Medical Biotechnology Research Group, VPLS, TÜBİTAK Marmara Research Center, Kocaeli, Turkiye.ORCID https://orcid.org/0000-0002-5402-2809
Ahmet MidiDepartment of Pathology, Faculty of Medicine, Bahçeşehir University, İstanbul, Turkiye.ORCID https://orcid.org/0000-0002-6197-7654
Hatice AslanoğluDepartment of Thoracic Surgery, Süreyyapaşa Training and Research Hospital, İstanbul, Turkiye.ORCID https://orcid.org/0000-0002-1772-625X
Nülüfer KaraDepartment of Thoracic Surgery, Süreyyapaşa Training and Research Hospital, İstanbul, Turkiye.ORCID https://orcid.org/0009-0005-3809-1096
Nilgün AlganDepartment of Thoracic Surgery, Süreyyapaşa Training and Research Hospital, İstanbul, Turkiye.ORCID https://orcid.org/0009-0001-0026-4925
Ayberk BoyacioğluDepartment of Thoracic Surgery, Süreyyapaşa Training and Research Hospital, İstanbul, Turkiye.ORCID https://orcid.org/0000-0002-1513-201X
Betül Karademir YilmazDivision of Biochemistry, Department of Basic Medical Sciences, Faculty of Medicine, Marmara University, İstanbul, Turkiye.ORCID https://orcid.org/0000-0003-1762-0284
Ali ŞahinDivision of Biochemistry, Department of Basic Medical Sciences, Faculty of Medicine, Marmara University, İstanbul, Turkiye.ORCID https://orcid.org/0000-0001-5594-1551
Hivda Ülbeği PolatMolecular Oncology Laboratory, Medical Biotechnology Research Group, VPLS, TÜBİTAK Marmara Research Center, Kocaeli, Turkiye.ORCID https://orcid.org/0000-0001-8424-6849
Abidin ŞehitoğullariDepartment of Thoracic Surgery, Faculty of Medicine, Sakarya University, Sakarya, Turkiye.ORCID https://orcid.org/0000-0002-4897-4205
Ali Osman ÇibikdikenDepartment of Computer Sciences and Engineering, KTO Karatay University, Konya, Turkiye.ORCID https://orcid.org/0000-0003-3478-3157
Mücahit BüyükyilmazEcolarium Digital Technologies Inc., İstanbul, Turkiye.ORCID https://orcid.org/0009-0002-0117-2886
İbrahim Berkan AydilekDepartment of Computer Engineering, Faculty of Engineering, Harran University, Şanlıurfa, Turkiye.ORCID https://orcid.org/0000-0001-8037-8625
Abdulkerim EneşDepartment of Computer Engineering, Faculty of Engineering, Harran University, Şanlıurfa, Turkiye.ORCID https://orcid.org/0009-0004-2637-4227
Sevde KüçükerMolecular Oncology Laboratory, Medical Biotechnology Research Group, VPLS, TÜBİTAK Marmara Research Center, Kocaeli, Turkiye.ORCID https://orcid.org/0009-0002-4162-439X
Fatih KarakayaMolecular Oncology Laboratory, Medical Biotechnology Research Group, VPLS, TÜBİTAK Marmara Research Center, Kocaeli, Turkiye.ORCID https://orcid.org/0000-0003-2667-3724
İhsan BoyaciDepartment of Internal Medicine, Faculty of Medicine, İstanbul Medipol University, İstanbul, Turkiye.ORCID https://orcid.org/0000-0001-7369-0426
Mahmut GümüşDepartment of Internal Medicine, Faculty of Medicine, İstanbul Medeniyet University, İstanbul, Turkiye.ORCID https://orcid.org/0000-0003-1899-0455
Onur ŞenolDepartment of Analytical Chemistry, Faculty of Pharmacy, Atatürk University, Erzurum, Turkiye.ORCID https://orcid.org/0000-0002-0252-396X
Merve ÖztuğTÜBİTAK National Metrology Institute, Kocaeli, Turkiye.ORCID https://orcid.org/0000-0002-6287-2774
Evren SabanTÜBİTAK National Metrology Institute, Kocaeli, Turkiye.ORCID https://orcid.org/0000-0002-1968-1470
Ömer SoysalDepartment of Thoracic Surgery, Faculty of Medicine, Bezmialem Vakıf University, İstanbul, Turkiye.ORCID https://orcid.org/0000-0002-8832-9171
Nur BüyükpinarbaşiliDepartment of Pathology, Faculty of Medicine, Bezmialem Vakıf University, İstanbul, Turkiye.ORCID https://orcid.org/0000-0002-8832-9171
Akif TurnaDepartment of Thoracic Surgery, Faculty of Medicine, İstanbul University-Cerrahpaşa, İstanbul, Turkiye.ORCID https://orcid.org/0000-0003-3229-830X
Mehmet Zeki GünlüoğluDepartment of Thoracic Surgery, Faculty of Medicine, İstanbul Medipol University, İstanbul, Turkiye.ORCID https://orcid.org/0000-0002-6952-3470
Aslı ÇakirDepartment of Pathology, Faculty of Medicine, İstanbul Medipol University, İstanbul, Turkiye.ORCID https://orcid.org/0000-0003-0128-6947
Şaban TekinDivision of Medical Biology, Department of Basic Medical Sciences, Faculty of Medicine, University of Health Sciences, İstanbul, Turkiye.ORCID https://orcid.org/0000-0003-2641-6293
Uygar TazebayDepartment of Molecular Biology and Genetics, Gebze Technical University, Kocaeli, Turkiye.ORCID https://orcid.org/0000-0003-1999-8213
Abdullah KaradağMolecular Oncology Laboratory, Medical Biotechnology Research Group, VPLS, TÜBİTAK Marmara Research Center, Kocaeli, Turkiye.ORCID https://orcid.org/0000-0003-0969-7038

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background/aim: LUNGBANK was established as part of Project LUNGMARK, pioneering a biorepository dedicated exclusively to lung cancer research. It employs cutting-edge technologies to streamline the handling of biospecimens, ensuring the acquisition of high-quality samples. This infrastructure is fortified with robust data management capabilities, enabling seamless integration of diverse datasets. LUNGBANK functions not merely as a repository but as a sophisticated platform crucial for advancing lung cancer research, poised to facilitate significant discoveries. Materials and methods: LUNGBANK was meticulously designed to optimize every stage of biospecimen handling, from collection and storage to processing. Rigorous standard operating procedures and stringent quality control measures guarantee the integrity of collected biospecimens. Advanced data management protocols facilitate the efficient integration and analysis of various datasets, enhancing the depth and breadth of research possibilities in lung cancer. Results: LUNGBANK has amassed a comprehensive collection of biospecimens essential for unraveling the intricate molecular mechanisms of lung cancer. The integration of state-of-the-art technologies ensures the acquisition of top-tier data, fostering breakthroughs in translational and histological research. Moreover, the establishment of patient-derived systems by LUNGBANK underscores its pivotal role in personalized medicine approaches. Conclusion: The establishment of LUNGBANK marks a significant milestone in addressing the critical challenges of lung cancer research. By providing researchers with high-quality biospecimens and advanced research tools, LUNGBANK not only supports Project LUNGMARK's objectives but also contributes extensively to the broader landscape of personalized medicine. It promises to enhance our understanding of lung cancer initiation, progression, and therapeutic interventions tailored to individual patient needs, thereby advancing the field towards more effective diagnostic and therapeutic strategies.

Indexed as

biobankbiorepositoryintegrative multiomicsLung cancerP-medicine

Identifiers

PMID39050710
PMCPMC11265891

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.