Evidence map›Paper›PMID 39049182›Full record

ArticleEnvironmental microbiology reports2024

Phagotrophy in the nitrogen-fixing haptophyte Braarudosphaera bigelowii.

Esther Wing Kwan Mak, Kendra A Turk-Kubo, David A Caron, Rachel C Harbeitner, Jonathan D Magasin, Tyler H Coale, Kyoko Hagino, Yoshihito Takano, Tomohiro Nishimura, Masao Adachi and 1 more

Abstract read
In one paragraph

Article in Environmental microbiology reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Diel remodeling and cellular integration of the nitroplast.bioRxiv : the preprint server for biology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Esther Wing Kwan MakDepartment of Ocean Sciences, University of California, Santa Cruz, California, USA.ORCID 0009-0008-0849-5489
Kendra A Turk-KuboDepartment of Ocean Sciences, University of California, Santa Cruz, California, USA.ORCID 0000-0002-9847-7514
David A CaronDepartment of Biological Sciences, University of Southern California, Los Angeles, California, USA.ORCID 0000-0003-2164-3606
Rachel C HarbeitnerDepartment of Ocean Sciences, University of California, Santa Cruz, California, USA.ORCID 0000-0002-1523-1093
Jonathan D MagasinDepartment of Ocean Sciences, University of California, Santa Cruz, California, USA.ORCID 0000-0003-4187-4778
Tyler H CoaleDepartment of Ocean Sciences, University of California, Santa Cruz, California, USA.ORCID 0000-0001-8512-9310
Kyoko HaginoMarine Core Research Institute, Kochi University, Nankoku, Japan.ORCID 0000-0002-1489-5541
Yoshihito TakanoMarine Core Research Institute, Kochi University, Nankoku, Japan.ORCID 0009-0004-3869-5669
Tomohiro NishimuraFaculty of Agriculture and Marine Science, Kochi University, Nankoku, Japan.ORCID 0000-0001-7040-7576
Masao AdachiFaculty of Agriculture and Marine Science, Kochi University, Nankoku, Japan.ORCID 0000-0001-6062-3160
Jonathan P ZehrDepartment of Ocean Sciences, University of California, Santa Cruz, California, USA.ORCID 0000-0002-5691-5408

Funding

Simons Foundation 724220Simons Foundation 824082
6 · The paper itself

Abstract

Biological nitrogen fixation provides fixed nitrogen for microbes living in the oligotrophic open ocean. UCYN-A2, the previously known symbiont of Braarudosphaera bigelowii, now believed to be an early-stage B. bigelowii organelle that exchanges fixed nitrogen for fixed carbon, is globally distributed. Indirect evidence suggested that B. bigelowii might be a mixotrophic (phagotrophic) phototrophic flagellate. The goal of this study was to determine if B. bigelowii can graze on bacteria using several independent approaches. The results showed that B. bigelowii grazed on co-occurring bacteria at a rate of 5-7 cells/h/B. bigelowii and that the overall grazing rate was significantly higher at nighttime than at daytime. Bacterial abundance changes, assessed with 16S rRNA gene amplicon sequencing analysis, may have indicated preferential grazing by B. bigelowii on specific bacterial genotypes. In addition, Lysotracker™ staining of B. bigelowii suggested digestive activity inside B. bigelowii. Carbon and nitrogen fixation measurements revealed that the carbon demand of B. bigelowii could not be fulfilled by photosynthesis alone, implying supplementation by heterotrophy. These independent lines of evidence together revealed that B. bigelowii engages in phagotrophy, which, beyond serving as a supplementary source of carbon and energy, may also facilitate the indirect assimilation of inorganic nutrients.

Indexed as

HaptophytaNitrogen FixationSymbiosisBacteriaCarbonNitrogenPhagocytosisPhylogenyRNA, Ribosomal, 16SCarbonNitrogenRNA, Ribosomal, 16S

Identifiers

PMID39049182
PMCPMC11269211

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.