Evidence map›Paper›PMID 39046770›Full record

ArticleBlood2024

KDM6A regulates immune response genes in multiple myeloma.

Daphné Dupéré-Richer, Alberto Riva, Benjamin G Barwick, Sayantan Maji, Heidi Casellas Román, Jianping Li, Umasankar De, Amin Sobh, Gabrielle Quickstad, Crissandra Piper and 9 more

Abstract read
In one paragraph

Article in Blood, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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  15. Discovery and structural studies of histone demethylases.Frontiers in epigenetics and epigenomics · 2025
    Review
  16. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors.

Daphné Dupéré-RicherDivision of Hematology/Oncology, University of Florida Health Cancer Center, University of Florida, Gainesville, FL.ORCID 0000-0003-2236-262X
Alberto RivaInterdisciplinary Center for Biotechnology Research, University of Florida, Gainesville, FL.ORCID 0000-0001-9150-8333
Benjamin G BarwickDepartment of Hematology and Medical Oncology, School of Medicine, Emory University, Winship Cancer Institute, Atlanta, GA.ORCID 0000-0001-9810-3566
Sayantan MajiDivision of Hematology/Oncology, University of Florida Health Cancer Center, University of Florida, Gainesville, FL.
Heidi Casellas RománDivision of Hematology/Oncology, University of Florida Health Cancer Center, University of Florida, Gainesville, FL.
Jianping LiDivision of Hematology/Oncology, University of Florida Health Cancer Center, University of Florida, Gainesville, FL.ORCID 0000-0002-3972-1652
Umasankar DeDepartment of Pathology, Immunology and Laboratory Medicine, University of Florida Health Cancer Center, University of Florida, Gainesville, FL.
Amin SobhDivision of Hematology/Oncology, University of Florida Health Cancer Center, University of Florida, Gainesville, FL.
Gabrielle QuickstadDivision of Hematology/Oncology, University of Florida Health Cancer Center, University of Florida, Gainesville, FL.ORCID 0000-0003-2458-8286
Crissandra PiperDivision of Hematology/Oncology, University of Florida Health Cancer Center, University of Florida, Gainesville, FL.
Marta KulisInstitut d'Investigacions Biomèdiques August Pi i Sunyer, Universitat de Barcelona, Barcelona, Spain.ORCID 0000-0001-8104-9620
Teresa EzpondaHemato-Oncology Department, Cima Universidad de Navarra, Instituto de Investigación Sanitaria de Navarra, Pamplona, Spain.ORCID 0000-0003-3682-7125
José Ignacio Martín-SuberoInstitut d'Investigacions Biomèdiques August Pi i Sunyer, Universitat de Barcelona, Barcelona, Spain.ORCID 0000-0001-8809-5195
Giovanni TononCenter for Translational Genomics and Bioinformatics, IRCCS San Raffaele Scientific Institute, Milano, Italy.ORCID 0000-0003-2973-5038
Weizhou ZhangDepartment of Pathology, Immunology and Laboratory Medicine, University of Florida Health Cancer Center, University of Florida, Gainesville, FL.ORCID 0000-0002-8236-0346
Constantine S MitsiadesDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.
Lawrence H BoiseDepartment of Hematology and Medical Oncology, School of Medicine, Emory University, Winship Cancer Institute, Atlanta, GA.ORCID 0000-0001-9436-8815
Richard L BennettDivision of Hematology/Oncology, University of Florida Health Cancer Center, University of Florida, Gainesville, FL.ORCID 0000-0002-0243-2443
Jonathan D LichtDivision of Hematology/Oncology, University of Florida Health Cancer Center, University of Florida, Gainesville, FL.ORCID 0000-0002-3942-1369

Funding

University of Florida Health Cancer Center Support GrantP30CA247796 · NCI · UNIVERSITY OF FLORIDA · PI Christian Jobin · 2023 to 2026
$10.9M
Proteolysis-targeting chimera against BCL-XL inhibits breast cancer metastasisR01CA260239 · NCI · UNIVERSITY OF FLORIDA · PI ZHANG, WEIZHOU · 2021 to 2025
$2.5M
Exploring novel therapeutic strategies for combinatory therapy to treat renal clear cell carcinomasR01CA269661 · NCI · UNIVERSITY OF FLORIDA · PI Weizhou Zhang · 2023 to 2026
$1.9M
UTX, MLL AND PATHOGENIC DEREGULATION OF HISTONE METHYLATION IN MULTIPLE MYELOMAR01CA180475 · NCI · UNIVERSITY OF FLORIDA · PI LICHT, JONATHAN D. · 2014 to 2020
$1.8M
Revealing the cis-Regulatory Function of IMiDs in Multiple Myeloma”.K22CA266739 · NCI · EMORY UNIVERSITY · PI BARWICK, BENJAMIN GABRIEL · 2023 to 2025
$562k
Investigating epigenetic mechanisms of cancerR50CA293837 · NCI · VAN ANDEL RESEARCH INSTITUTE · PI Richard L Bennett · 2024 to 2026
$528k
NCI NIH HHS K22 CA266739NCI NIH HHS P30 CA247796NCI NIH HHS R01 CA180475NCI NIH HHS R01 CA260239NCI NIH HHS R01 CA269661NCI NIH HHS R50 CA293837
6 · The paper itself

Abstract

abstractThe histone H3 at lysine 27 (H3K27) demethylase lysine demethylase 6A (KDM6A) is a tumor suppressor in multiple cancers, including multiple myeloma (MM). We created isogenic MM cells disrupted for KDM6A and tagged the endogenous protein to facilitate genome-wide studies. KDM6A binds genes associated with immune recognition and cytokine signaling. Most importantly, KDM6A binds and activates NLRC5 and CIITA, which encode regulators of major histocompatibility complex genes. Patient data indicate that NLRC5 and CIITA are downregulated in MM with low KDM6A expression. Chromatin analysis shows that KDM6A binds poised and active enhancers and KDM6A loss led to decreased H3K27ac at enhancers, increased H3K27me3 levels in body of genes bound by KDM6A, and decreased gene expression. Reestablishing histone acetylation with an HDAC3 inhibitor leads to upregulation of major histocompatibility complex expression, offering a strategy to restore immunogenicity of KDM6A-deficient tumors. Loss of Kdm6a in Kirsten rat sarcoma virus (K-RAS)-transformed murine fibroblasts led to increased growth in vivo associated with decreased T-cell infiltration.

Indexed as

Gene Expression Regulation, NeoplasticHistone DemethylasesMultiple MyelomaAnimalsCell Line, TumorHistonesHumansIntracellular Signaling Peptides and ProteinsMiceNuclear ProteinsTrans-ActivatorsHistone DemethylasesHistonesIntracellular Signaling Peptides and ProteinsKDM6A protein, humanMHC class II transactivator proteinNuclear ProteinsTrans-Activators

Identifiers

PMID39046770
PMCPMC11952010

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.