Evidence map›Paper›PMID 39045514›Full record

ArticleDiscovery immunology2024

Assessing immune phenotypes using simple proxy measures: promise and limitations.

Alexander E Downie, Ramya S Barre, Annie Robinson, Jennie Yang, Ying-Han Chen, Jian-Da Lin, Oyebola Oyesola, Frank Yeung, Ken Cadwell, P'ng Loke and 1 more

Abstract read
In one paragraph

Article in Discovery immunology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Antibodies and Inflammation: Fecal Biomarkers of Gut Health in Domestic Ruminants.Journal of experimental zoology. Part A, Ecological and integrative physiology · 2025
    Article
  6. Article
  7. Context matters: Immunology meets ecology.Discovery immunology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Alexander E DownieDepartment of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ, USA.ORCID https://orcid.org/0000-0002-6743-620X
Ramya S BarreDepartment of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ, USA.ORCID https://orcid.org/0000-0002-8773-6349
Annie RobinsonDepartment of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ, USA.
Jennie YangDepartment of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ, USA.
Ying-Han ChenKimmel Center for Biology and Medicine at the Skirball Institute, New York University Grossman School of Medicine; New York, NY, USA.ORCID https://orcid.org/0000-0002-6720-8610
Jian-Da LinDepartment of Biochemical Science and Technology, College of Life Science, National Taiwan University, Taipei City, Taiwan.ORCID https://orcid.org/0000-0003-3697-4766
Oyebola OyesolaLaboratory of Parasitic Diseases, National Institute for Allergy and Infectious Diseases, National Institutes of Health; Bethesda, MD, USA.ORCID https://orcid.org/0000-0002-5347-7502
Frank YeungKimmel Center for Biology and Medicine at the Skirball Institute, New York University Grossman School of Medicine; New York, NY, USA.
Ken CadwellKimmel Center for Biology and Medicine at the Skirball Institute, New York University Grossman School of Medicine; New York, NY, USA.ORCID https://orcid.org/0000-0002-5860-0661
P'ng LokeKimmel Center for Biology and Medicine at the Skirball Institute, New York University Grossman School of Medicine; New York, NY, USA.ORCID https://orcid.org/0000-0002-6211-3292
Andrea L GrahamDepartment of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ, USA.ORCID https://orcid.org/0000-0002-6580-2755

Funding

Regulation of mucosal immune responses by helminth infectionsZIAAI001255 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI LOKE, P'NG · 2020 to 2025
$6.1M
Investigating reprogramming of the immune system by parasitic helminths and environmental antigensZIAAI001386 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI OYESOLA, OYEBOLA · 2024 to 2025
$2.3M
6 · The paper itself

Abstract

The study of immune phenotypes in wild animals is beset by numerous methodological challenges, with assessment of detailed aspects of phenotype difficult to impossible. This constrains the ability of disease ecologists and ecoimmunologists to describe immune variation and evaluate hypotheses explaining said variation. The development of simple approaches that allow characterization of immune variation across many populations and species would be a significant advance. Here we explore whether serum protein concentrations and coarse-grained white blood cell profiles, immune quantities that can easily be assayed in many species, can predict, and therefore serve as proxies for, lymphocyte composition properties. We do this in rewilded laboratory mice, which combine the benefits of immune phenotyping of lab mice with the natural context and immune variation found in the wild. We find that easily assayed immune quantities are largely ineffective as predictors of lymphocyte composition, either on their own or with other covariates. Immunoglobulin G (IgG) concentration and neutrophil-lymphocyte ratio show the most promise as indicators of other immune traits, but their explanatory power is limited. Our results prescribe caution in inferring immune phenotypes beyond what is directly measured, but they do also highlight some potential paths forward for the development of proxy measures employable by ecoimmunologists.

Indexed as

antibodiesdisease ecologyecoimmunologylymphocytes

Identifiers

PMID39045514
PMCPMC11264049

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.