Evidence map›Paper›PMID 39045129›Full record

ArticleJBMR plus2024

Osteocyte gene expression analysis in mouse bone: optimization of a laser-assisted microdissection protocol.

Mathilde Palmier, Marlène Maître, Hélène Doat, Thierry Lesté-Lasserre, Delphine B Maurel, Claudine Boiziau

Abstract read
In one paragraph

Article in JBMR plus, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Mathilde PalmierInserm, University of Bordeaux, BioTis Laboratory UMR 1026, Bordeaux, France.ORCID https://orcid.org/0009-0009-4051-5029
Marlène MaîtreInserm, University of Bordeaux, Neurocentre Magendie UMR 1215, Bordeaux, France.
Hélène DoatInserm, University of Bordeaux, Neurocentre Magendie UMR 1215, Bordeaux, France.
Thierry Lesté-LasserreInserm, University of Bordeaux, Neurocentre Magendie UMR 1215, Bordeaux, France.
Delphine B MaurelInserm, University of Bordeaux, BioTis Laboratory UMR 1026, Bordeaux, France.
Claudine BoiziauInserm, University of Bordeaux, BioTis Laboratory UMR 1026, Bordeaux, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Among bone cells, osteocytes are the most abundant, but also the most challenging to study because they are located inside a dense mineralized matrix. Due to their involvement in bone homeostasis, diverse tools are needed to understand their roles in bone physiology and pathology. This work was aimed at establishing a laser-assisted microdissection protocol to isolate osteocytes and analyze their gene expressions. The goal was to overcome the limitations of the technique currently most used: RNA extraction from the whole bone. To perform laser microdissection and subsequent gene expression analysis, the five main steps of the protocol have been adapted for the bone tissue. After testing many parameters, we found that the best options were (1) take unfixed snap-frozen tissue, (2) cryosection with a supported tape system to improve the tissue morphology if necessary, (3) microdissect regions of interest, and (4) recover the bone pieces by catapulting, if feasible, or by gravity. Finally, RNA extraction (5) was the most efficient with a precipitation method and allowed quantifying the expression of well described osteocyte genes (

Indexed as

bone cellscortical bonegene expressionUV laser

Identifiers

PMID39045129
PMCPMC11264292

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.