Evidence map›Paper›PMID 39045014›Full record

ArticlePNAS nexus2024

DNA-encoded probe-based assay for profiling plant kinase activities.

Yuan-Chi Chien, C Alexander Valencia, Han Yong Lee, Gyeong Mee Yoon, Dongwook Kim

Abstract read
In one paragraph

Article in PNAS nexus, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yuan-Chi ChienDepartment of Botany and Plant Pathology and Center for Plant Biology, Purdue University, West Lafayette, IN 47907, USA.
C Alexander ValenciaInterpath Laboratory, Pendleton, OR 97801, USA.
Han Yong LeeDepartment of Botany and Plant Pathology and Center for Plant Biology, Purdue University, West Lafayette, IN 47907, USA.ORCID https://orcid.org/0000-0001-8833-7430
Gyeong Mee YoonDepartment of Botany and Plant Pathology and Center for Plant Biology, Purdue University, West Lafayette, IN 47907, USA.ORCID https://orcid.org/0000-0003-3936-0700
Dongwook KimDepartment of Botany and Plant Pathology and Center for Plant Biology, Purdue University, West Lafayette, IN 47907, USA.ORCID https://orcid.org/0000-0002-7751-0178

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Elucidating kinase-substrate relationships is pivotal for deciphering cellular signaling mechanisms, yet it remains challenging due to the complexity of kinase networks. Herein, we report the development of a versatile DNA-based kinase assay platform for high-throughput profiling of plant protein kinase activities and substrate preferences. Our approach employs DNA-linked peptide substrates, facilitating quantitative and specific kinase activity detection through next-generation DNA sequencing. Leveraging DNA barcodes as quantitative readouts, our approach establishes a high-throughput, sensitive, and specific platform for dissecting kinase-substrate networks in plants, representing a powerful tool for elucidating signaling mechanisms in plants.

Indexed as

and kinase activityDNA-linked probeNGSqPCR

Identifiers

PMID39045014
PMCPMC11263872

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.