Evidence map›Paper›PMID 39043664›Full record

ArticleNature communications2024

A multi-classifier system integrated by clinico-histology-genomic analysis for predicting recurrence of papillary renal cell carcinoma.

Kang-Bo Huang, Cheng-Peng Gui, Yun-Ze Xu, Xue-Song Li, Hong-Wei Zhao, Jia-Zheng Cao, Yu-Hang Chen, Yi-Hui Pan, Bing Liao, Yun Cao and 31 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

41 authors.

Kang-Bo Huang *Department of Urology, First Affiliated Hospital, Sun Yat-sen University, Guangzhou, China.ORCID 0000-0002-7337-9774
Cheng-Peng Gui *Department of Urology, First Affiliated Hospital, Sun Yat-sen University, Guangzhou, China.
Yun-Ze Xu *Department of Urology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.
Xue-Song Li *Department of Urology, Peking University First Hospital, Institute of Urology, Peking University, National Urological Cancer Center, Beijing, China.
Hong-Wei Zhao *Department of Urology, Affiliated Yantai Yuhuangding Hospital, Qingdao University, Yantai, China.
Jia-Zheng Cao *Department of Urology, Jiangmen Hospital, Sun Yat-sen University, Jiangmen, China.
Yu-Hang ChenDepartment of Urology, First Affiliated Hospital, Sun Yat-sen University, Guangzhou, China.
Yi-Hui PanDepartment of Urology, The Third Affiliated Hospital of Soochow University, Changzhou, China.
Bing LiaoDepartment of Pathology, First Affiliated Hospital, Sun Yat-sen University, Guangzhou, China.
Yun CaoState Key Laboratory of Oncology in South China, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-sen University Cancer center, Guangzhou, China.ORCID 0000-0002-3001-0395
Xin-Ke ZhangState Key Laboratory of Oncology in South China, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-sen University Cancer center, Guangzhou, China.ORCID 0000-0002-3527-2140
Hui HanDepartment of Urology, Sun Yat-sen University Cancer center, Guangzhou, China.
Fang-Jian ZhouDepartment of Urology, Sun Yat-sen University Cancer center, Guangzhou, China.ORCID 0000-0001-6581-8151
Ran-Yi LiuState Key Laboratory of Oncology in South China, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-sen University Cancer center, Guangzhou, China.ORCID 0000-0002-3986-0177
Wen-Fang ChenDepartment of Pathology, First Affiliated Hospital, Sun Yat-sen University, Guangzhou, China.
Ze-Ying JiangDepartment of Pathology, First Affiliated Hospital, Sun Yat-sen University, Guangzhou, China.
Zi-Hao FengDepartment of Urology, First Affiliated Hospital, Sun Yat-sen University, Guangzhou, China.
Fu-Neng JiangDepartment of Urology, Guangdong Key Laboratory of Clinical Molecular Medicine and Diagnostics, Guangzhou First People's Hospital, School of Medicine, South China University of Technology, Guangzhou, China.
Yan-Fei YuDepartment of Urology, Peking University First Hospital, Institute of Urology, Peking University, National Urological Cancer Center, Beijing, China.
Sheng-Wei XiongDepartment of Urology, Peking University First Hospital, Institute of Urology, Peking University, National Urological Cancer Center, Beijing, China.
Guan-Peng HanDepartment of Urology, Peking University First Hospital, Institute of Urology, Peking University, National Urological Cancer Center, Beijing, China.
Qi TangDepartment of Urology, Peking University First Hospital, Institute of Urology, Peking University, National Urological Cancer Center, Beijing, China.
Kui OuyangDepartment of Urology, Affiliated Yantai Yuhuangding Hospital, Qingdao University, Yantai, China.
Gui-Mei QuDepartment of Pathology, Affiliated Yantai Yuhuangding Hospital, Qingdao University, Yantai, China.
Ji-Tao WuDepartment of Urology, Affiliated Yantai Yuhuangding Hospital, Qingdao University, Yantai, China.
Ming CaoDepartment of Urology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.
Bai-Jun DongDepartment of Urology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.ORCID 0000-0002-5721-9586
Yi-Ran HuangDepartment of Urology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.
Jin ZhangDepartment of Urology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.
Cai-Xia LiSchool of Mathematics and Computational Science, Sun Yat-sen University, Guangzhou, China.
Pei-Xing LiSchool of Mathematics and Computational Science, Sun Yat-sen University, Guangzhou, China.
Wei ChenDepartment of Urology, First Affiliated Hospital, Sun Yat-sen University, Guangzhou, China.
Wei-De ZhongDepartment of Urology, Guangdong Key Laboratory of Clinical Molecular Medicine and Diagnostics, Guangzhou First People's Hospital, School of Medicine, South China University of Technology, Guangzhou, China.ORCID 0000-0002-0430-2845
Jian-Ping GuoInstitute of Precision Medicine, First Affiliated Hospital, Sun Yat-sen University, Guangzhou, China.ORCID 0000-0002-8158-0101
Zhi-Ping LiuDepartment of Internal Medicine and Department of Molecular Biology, University of Texas Southwestern Medical Center at Dallas, Dallas, TX, USA.ORCID 0000-0003-1341-3878
Jer-Tsong HsiehDepartment of Urology, University of Texas Southwestern Medical Center at Dallas, Dallas, TX, USA.ORCID 0000-0002-1919-6010
Dan XieState Key Laboratory of Oncology in South China, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-sen University Cancer center, Guangzhou, China.ORCID 0000-0003-2242-3138
Mu-Yan CaiState Key Laboratory of Oncology in South China, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-sen University Cancer center, Guangzhou, China.ORCID 0000-0002-4646-4391
Wei XueDepartment of Urology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China. uroxuewei@163.com.ORCID 0000-0001-9298-9941
Jin-Huan WeiDepartment of Urology, First Affiliated Hospital, Sun Yat-sen University, Guangzhou, China. weijh23@mail.sysu.edu.cn.
Jun-Hang LuoDepartment of Urology, First Affiliated Hospital, Sun Yat-sen University, Guangzhou, China. luojunh@mail.sysu.edu.cn.ORCID 0000-0002-5706-0990

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Integrating genomics and histology for cancer prognosis demonstrates promise. Here, we develop a multi-classifier system integrating a lncRNA-based classifier, a deep learning whole-slide-image-based classifier, and a clinicopathological classifier to accurately predict post-surgery localized (stage I-III) papillary renal cell carcinoma (pRCC) recurrence. The multi-classifier system demonstrates significantly higher predictive accuracy for recurrence-free survival (RFS) compared to the three single classifiers alone in the training set and in both validation sets (C-index 0.831-0.858 vs. 0.642-0.777, p < 0.05). The RFS in our multi-classifier-defined high-risk stage I/II and grade 1/2 groups is significantly worse than in the low-risk stage III and grade 3/4 groups (p < 0.05). Our multi-classifier system is a practical and reliable predictor for recurrence of localized pRCC after surgery that can be used with the current staging system to more accurately predict disease course and inform strategies for individualized adjuvant therapy.

Indexed as

Carcinoma, Renal CellKidney NeoplasmsNeoplasm Recurrence, LocalAdultAgedDeep LearningDisease-Free SurvivalFemaleGenomicsHumansMaleMiddle AgedNeoplasm StagingPrognosis

Identifiers

PMID39043664
PMCPMC11266571

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.