Evidence map›Paper›PMID 39041057›Full record

ArticleEuropean journal of radiology open2024

Automated algorithm for medical data structuring, and segmentation using artificial intelligence within secured environment for dataset creation.

Varatharajan Nainamalai, Hemin Ali Qair, Egidijus Pelanis, Håvard Bjørke Jenssen, Åsmund Avdem Fretland, Bjørn Edwin, Ole Jakob Elle, Ilangko Balasingham

Abstract read
In one paragraph

Article in European journal of radiology open, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Varatharajan NainamalaiThe Intervention Centre, Rikshospitalet, Oslo University Hospital, Oslo, Norway.
Hemin Ali QairThe Intervention Centre, Rikshospitalet, Oslo University Hospital, Oslo, Norway.
Egidijus PelanisThe Intervention Centre, Rikshospitalet, Oslo University Hospital, Oslo, Norway.
Håvard Bjørke JenssenDepartment of Radiology and Nuclear Medicine, Oslo University Hospital, Oslo, Norway.
Åsmund Avdem FretlandThe Intervention Centre, Rikshospitalet, Oslo University Hospital, Oslo, Norway.
Bjørn EdwinThe Intervention Centre, Rikshospitalet, Oslo University Hospital, Oslo, Norway.
Ole Jakob ElleThe Intervention Centre, Rikshospitalet, Oslo University Hospital, Oslo, Norway.
Ilangko BalasinghamThe Intervention Centre, Rikshospitalet, Oslo University Hospital, Oslo, Norway.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objective: Routinely collected electronic health records using artificial intelligence (AI)-based systems bring out enormous benefits for patients, healthcare centers, and its industries. Artificial intelligence models can be used to structure a wide variety of unstructured data. Methods: We present a semi-automatic workflow for medical dataset management, including data structuring, research extraction, AI-ground truth creation, and updates. The algorithm creates directories based on keywords in new file names. Results: Our work focuses on organizing computed tomography (CT), magnetic resonance (MR) images, patient clinical data, and segmented annotations. In addition, an AI model is used to generate different initial labels that can be edited manually to create ground truth labels. The manually verified ground truth labels are later included in the structured dataset using an automated algorithm for future research. Conclusion: This is a workflow with an AI model trained on local hospital medical data with output based/adapted to the users and their preferences. The automated algorithms and AI model could be implemented inside a secondary secure environment in the hospital to produce inferences.

Indexed as

Artificial intelligenceElectronic health recordsGround truth creationSegmentationStructured data

Identifiers

PMID39041057
PMCPMC11260947

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.