Evidence map›Paper›PMID 39040986›Full record

ArticleJournal of biomedical optics2024

Hyperspectral imaging of 4T1 mammary carcinomas grown in dorsal skinfold window chambers: spectral renormalization and fluorescence modeling.

Tadej Tomanic, Tim Bozic, Bostjan Markelc, Jost Stergar, Gregor Sersa, Matija Milanic

Abstract read
In one paragraph

Article in Journal of biomedical optics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Tadej TomanicUniversity of Ljubljana, Faculty of Mathematics and Physics, Ljubljana, Slovenia.ORCID 0000-0002-5398-335X
Tim BozicInstitute of Oncology Ljubljana, Department of Experimental Oncology, Ljubljana, Slovenia.ORCID 0000-0001-6468-8287
Bostjan MarkelcInstitute of Oncology Ljubljana, Department of Experimental Oncology, Ljubljana, Slovenia.
Jost StergarUniversity of Ljubljana, Faculty of Mathematics and Physics, Ljubljana, Slovenia.ORCID 0000-0002-8629-4649
Gregor SersaInstitute of Oncology Ljubljana, Department of Experimental Oncology, Ljubljana, Slovenia.ORCID 0000-0002-7641-5670
Matija MilanicUniversity of Ljubljana, Faculty of Mathematics and Physics, Ljubljana, Slovenia.ORCID 0000-0002-4417-0293

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Significance: Hyperspectral imaging (HSI) of murine tumor models grown in dorsal skinfold window chambers (DSWCs) offers invaluable insight into the tumor microenvironment. However, light loss in a glass coverslip is often overlooked, and particular tissue characteristics are improperly modeled, leading to errors in tissue properties extracted from hyperspectral images. Aim: We highlight the significance of spectral renormalization in HSI of DSWC models and demonstrate the benefit of incorporating enhanced green fluorescent protein (EGFP) excitation and emission in the skin tissue model for tumors expressing genes to produce EGFP. Approach: We employed an HSI system for intravital imaging of mice with 4T1 mammary carcinoma in a DSWC over 14 days. We performed spectral renormalization of hyperspectral images based on the measured reflectance spectra of glass coverslips and utilized an inverse adding-doubling (IAD) algorithm with a two-layer murine skin model, to extract tissue parameters, such as total hemoglobin concentration and tissue oxygenation ( Results: Hyperspectral image renormalization and the addition of EGFP fluorescence in the murine skin model reduced the mean absolute percentage errors (MAPEs) of fitted and measured spectra by up to 10% in tissue phantoms, 0.55% to 1.5% in the human forearm experiment and numerical simulations, and up to 0.7% in 4T1 tumors. Similarly, the MAPEs for tissue parameters extracted by IAD were reduced by up to 3% in human forearms and numerical simulations. For some parameters, statistically significant differences ( Conclusions: The results contribute to improving intravital monitoring of DWSC models using HSI and pave the way for more accurate and precise quantitative imaging.

Indexed as

Green Fluorescent ProteinsHyperspectral ImagingAlgorithmsAnimalsCell Line, TumorFemaleImage Processing, Computer-AssistedMammary Neoplasms, ExperimentalMiceMice, Inbred BALB COptical ImagingSkinenhanced green fluorescent proteinGreen Fluorescent Proteinsdorsal skinfold window chambersenhanced green fluorescent proteinhyperspectral imagingrenormalizationtissue modeltumors

Identifiers

PMID39040986
PMCPMC11262746

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.