Evidence map›Paper›PMID 39038209›Full record

ArticleThe Plant cell2024

The transcription factors ZAT5 and BLH2/4 regulate homogalacturonan demethylesterification in Arabidopsis seed coat mucilage.

Minmin Xie, Anming Ding, Yongfeng Guo, Jinhao Sun, Wanya Qiu, Mingli Chen, Zhiyuan Li, Shanshan Li, Gongke Zhou, Yan Xu and 4 more

Abstract read
In one paragraph

Article in The Plant cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Minmin XieKey Laboratory of Tobacco Gene Resources, Biotechnology Center, Tobacco Research Institute, Chinese Academy of Agricultural Sciences (CAAS), Qingdao 266101, China.ORCID 0000-0002-6832-586X
Anming DingKey Laboratory of Tobacco Gene Resources, Biotechnology Center, Tobacco Research Institute, Chinese Academy of Agricultural Sciences (CAAS), Qingdao 266101, China.ORCID 0000-0001-7566-4678
Yongfeng GuoKey Laboratory of Tobacco Gene Resources, Biotechnology Center, Tobacco Research Institute, Chinese Academy of Agricultural Sciences (CAAS), Qingdao 266101, China.ORCID 0000-0002-2033-7386
Jinhao SunKey Laboratory of Tobacco Gene Resources, Biotechnology Center, Tobacco Research Institute, Chinese Academy of Agricultural Sciences (CAAS), Qingdao 266101, China.ORCID 0000-0002-8996-9066
Wanya QiuKey Laboratory of Tobacco Gene Resources, Biotechnology Center, Tobacco Research Institute, Chinese Academy of Agricultural Sciences (CAAS), Qingdao 266101, China.ORCID 0009-0003-3742-398X
Mingli ChenKey Laboratory of Tobacco Gene Resources, Biotechnology Center, Tobacco Research Institute, Chinese Academy of Agricultural Sciences (CAAS), Qingdao 266101, China.ORCID 0000-0002-0169-1814
Zhiyuan LiKey Laboratory of Tobacco Gene Resources, Biotechnology Center, Tobacco Research Institute, Chinese Academy of Agricultural Sciences (CAAS), Qingdao 266101, China.ORCID 0000-0003-3052-1109
Shanshan LiKey Laboratory of Tobacco Gene Resources, Biotechnology Center, Tobacco Research Institute, Chinese Academy of Agricultural Sciences (CAAS), Qingdao 266101, China.ORCID 0009-0000-6457-1361
Gongke ZhouCollege of Agronomy, Qingdao Agricultural University, Qingdao 266109, China.ORCID 0000-0002-0771-7165
Yan XuKey Laboratory of Biofuels, Qingdao Engineering Research Center of Biomass Resources and Environment, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao 266101, China.ORCID 0000-0002-1820-8788
Meng WangKey Laboratory of Tobacco Gene Resources, Biotechnology Center, Tobacco Research Institute, Chinese Academy of Agricultural Sciences (CAAS), Qingdao 266101, China.ORCID 0000-0002-9730-5550
Aurore RichelLaboratory of Biomass and Green Technologies, Gembloux Agro-Bio Tech, University of Liege, Gembloux 5030, Belgium.ORCID 0000-0002-4352-6542
Daping GongKey Laboratory of Tobacco Gene Resources, Biotechnology Center, Tobacco Research Institute, Chinese Academy of Agricultural Sciences (CAAS), Qingdao 266101, China.ORCID 0000-0002-2585-5457
Yingzhen KongKey Laboratory of Tobacco Gene Resources, Biotechnology Center, Tobacco Research Institute, Chinese Academy of Agricultural Sciences (CAAS), Qingdao 266101, China.ORCID 0000-0002-8144-066X

Funding

Key Science and Technology Project of the China National Tobacco Corporation 110202001023National Natural Science Foundation of China 32372163NSF DBI-0421683
6 · The paper itself

Abstract

The level of methylesterification alters the functional properties of pectin, which is believed to influence plant growth and development. However, the mechanisms that regulate demethylesterification remain largely unexplored. Pectin with a high degree of methylesterification is produced in the Golgi apparatus and then transferred to the primary cell wall where it is partially demethylesterified by pectin methylesterases (PMEs). Here, we show that in Arabidopsis (Arabidopsis thaliana) seed mucilage, pectin demethylesterification is negatively regulated by the transcription factor ZINC FINGER FAMILY PROTEIN5 (ZAT5). Plants carrying null mutations in ZAT5 had increased PME activity, decreased pectin methylesterification, and produced seeds with a thinner mucilage layer. We provide evidence that ZAT5 binds to a TGATCA motif and thereby negatively regulates methylesterification by reducing the expression of PME5, HIGHLY METHYL ESTERIFIED SEEDS (HMS)/PME6, PME12, and PME16. We also demonstrate that ZAT5 physically interacts with BEL1-LIKE HOMEODOMAIN2 (BLH2) and BLH4 transcription factors. BLH2 and BLH4 are known to modulate pectin demethylesterification by directly regulating PME58 expression. The ZAT5-BLH2/4 interaction provides a mechanism to control the degree of pectin methylesterification in seed coat mucilage by modifying each transcription factor's ability to regulate the expression of target genes encoding PMEs. Taken together, these findings reveal a transcriptional regulatory module comprising ZAT5, BLH2, and BLH4, that functions in modulating the demethylesterification of homogalacturonan in seed coat mucilage.

Indexed as

ArabidopsisArabidopsis ProteinsGene Expression Regulation, PlantPectinsPlant MucilageSeedsTranscription FactorsCarboxylic Ester HydrolasesEsterificationMutationArabidopsis ProteinsCarboxylic Ester HydrolasespectinesterasePectinsPlant Mucilagepolygalacturonic acidTranscription Factors

Identifiers

PMID39038209
PMCPMC11449064

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.