Evidence map›Paper›PMID 39037420›Full record

ArticleIUCrJ2024

Capturing the blue-light activated state of the Phot-LOV1 domain from Chlamydomonas reinhardtii using time-resolved serial synchrotron crystallography.

Guillaume Gotthard, Sandra Mous, Tobias Weinert, Raiza Nara Antonelli Maia, Daniel James, Florian Dworkowski, Dardan Gashi, Antonia Furrer, Dmitry Ozerov, Ezequiel Panepucci and 5 more

Abstract read
In one paragraph

Article in IUCrJ, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Sensing a rainbow of colors: algal photoreceptors.Frontiers in plant science · 2025
    Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Guillaume GotthardLaboratory of Biomolecular Research, Division of Biology and Chemistry, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.ORCID 0000-0003-2830-0286
Sandra MousInstitute of Molecular Biology and Biophysics, Department of Biology, ETH Zurich, 8093 Zürich, Switzerland.ORCID 0000-0002-3532-5978
Tobias WeinertLaboratory of Biomolecular Research, Division of Biology and Chemistry, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.ORCID 0000-0002-0339-3722
Raiza Nara Antonelli MaiaExperimental Molecular Biophysics, Department of Physics, Freie Universität Berlin, Arnimallee 14, 14195 Berlin, Germany.ORCID 0000-0003-1463-0102
Daniel JamesLaboratory of Biomolecular Research, Division of Biology and Chemistry, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.ORCID 0000-0002-8348-6661
Florian DworkowskiMacromolecular Crystallography, Swiss Light Source, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.ORCID 0000-0001-5004-8684
Dardan GashiLaboratory of Biomolecular Research, Division of Biology and Chemistry, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.
Antonia FurrerLaboratory of Biomolecular Research, Division of Biology and Chemistry, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.ORCID 0000-0001-9894-6985
Dmitry OzerovScience IT, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.ORCID 0000-0002-3274-1124
Ezequiel PanepucciLaboratory for Macromolecules and Bioimaging, Photon Science Division, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.ORCID 0000-0003-3388-997X
Meitian WangLaboratory for Macromolecules and Bioimaging, Photon Science Division, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.ORCID 0000-0002-5340-3036
Gebhard F X SchertlerLaboratory of Biomolecular Research, Division of Biology and Chemistry, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.ORCID 0000-0002-5846-6810
Joachim HeberleExperimental Molecular Biophysics, Department of Physics, Freie Universität Berlin, Arnimallee 14, 14195 Berlin, Germany.ORCID 0000-0001-6321-2615
Joerg StandfussLaboratory of Biomolecular Research, Division of Biology and Chemistry, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.
Przemyslaw NoglyInstitute of Molecular Biology and Biophysics, Department of Biology, ETH Zurich, 8093 Zürich, Switzerland.ORCID 0000-0002-8040-7753

Funding

Horizon 2020 Framework Programme 701647Narodowe Centrum Nauki UMO-2021/03/H/NZ1/00002Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung 192760Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung PZ00P3_174169
6 · The paper itself

Abstract

Light-oxygen-voltage (LOV) domains are small photosensory flavoprotein modules that allow the conversion of external stimuli (sunlight) into intracellular signals responsible for various cell behaviors (e.g. phototropism and chloroplast relocation). This ability relies on the light-induced formation of a covalent thioether adduct between a flavin chromophore and a reactive cysteine from the protein environment, which triggers a cascade of structural changes that result in the activation of a serine/threonine (Ser/Thr) kinase. Recent developments in time-resolved crystallography may allow the activation cascade of the LOV domain to be observed in real time, which has been elusive. In this study, we report a robust protocol for the production and stable delivery of microcrystals of the LOV domain of phototropin Phot-1 from Chlamydomonas reinhardtii (CrPhotLOV1) with a high-viscosity injector for time-resolved serial synchrotron crystallography (TR-SSX). The detailed process covers all aspects, from sample optimization to data collection, which may serve as a guide for soluble protein preparation for TR-SSX. In addition, we show that the crystals obtained preserve the photoreactivity using infrared spectroscopy. Furthermore, the results of the TR-SSX experiment provide high-resolution insights into structural alterations of CrPhotLOV1 from Δt = 2.5 ms up to Δt = 95 ms post-photoactivation, including resolving the geometry of the thioether adduct and the C-terminal region implicated in the signal transduction process.

Indexed as

Chlamydomonas reinhardtiiSynchrotronsCrystallography, X-RayLightPhototropinsProtein DomainsPhototropinsblue-light photoreceptorsChlamydomonas reinhardtiiCrPhotLOV1light–oxygen–voltage domainsroom-temperature crystallographystructural dynamicstime-resolved serial synchrotron crystallographyTR-SSX

Identifiers

PMID39037420
PMCPMC11364019

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.