Evidence map›Paper›PMID 39036970›Full record

ArticleNucleic acids research2024

ADBP-1 regulates ADR-2 nuclear localization to control editing substrate selection.

Berta Eliad, Noa Schneider, Orna Ben-Naim Zgayer, Yarden Amichan, Fabian Glaser, Emily A Erdmann, Suba Rajendren, Heather A Hundley, Ayelet T Lamm

Abstract read
In one paragraph

Article in Nucleic acids research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. ADARs mediate distinct RNA editing activity and gene regulation in thebioRxiv : the preprint server for biology · 2025
    Article
  3. Review
  4. Article
  5. Article
  6. ADR-2 regulates fertility and oocyte fate inbioRxiv : the preprint server for biology · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Berta EliadFaculty of Biology, Technion- Israel Institute of Technology, Technion City, Haifa 3200003, Israel.
Noa SchneiderFaculty of Biology, Technion- Israel Institute of Technology, Technion City, Haifa 3200003, Israel.
Orna Ben-Naim ZgayerFaculty of Biology, Technion- Israel Institute of Technology, Technion City, Haifa 3200003, Israel.
Yarden AmichanFaculty of Biology, Technion- Israel Institute of Technology, Technion City, Haifa 3200003, Israel.
Fabian GlaserTechnion Center for Structural Biology, Technion Human Health Initiative, Technion, Haifa 32000, Israel.
Emily A ErdmannDepartment of Biology, Indiana University, Bloomington, IN 47405, USA.
Suba RajendrenDepartment of Biology, Indiana University, Bloomington, IN 47405, USA.
Heather A HundleyDepartment of Biology, Indiana University, Bloomington, IN 47405, USA.
Ayelet T LammFaculty of Biology, Technion- Israel Institute of Technology, Technion City, Haifa 3200003, Israel.ORCID 0000-0002-5973-5218

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
Graduate Training Program in Quantitative and Chemical Biology at Indiana University BloomingtonT32GM131994 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI JARED C LEWIS · 2019 to 2026
$2.4M
Molecular mechanisms that regulate ADAR target recognition and RNA editing in vivoR01GM130759 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI HUNDLEY, HEATHER ANN · 2019 to 2023
$1.8M
Investigating the Roles of ADARs and A-to-I RNA Editing in Germline RNA RegulationF31HD110244 · NICHD · TRUSTEES OF INDIANA UNIVERSITY · PI ERDMANN, EMILY ANN · 2022 to 2024
$101k
Binational Israel-USA Science Foundation 2015091Israel Science Foundation 927/18Molecular and Cellular Biosciences 2018738NICHD NIH HHS F31 HD110244NIGMS NIH HHS R01 GM130759NIGMS NIH HHS T32 GM131994NIH HHS P40 OD010440NIH HHS R01 GM130759
6 · The paper itself

Abstract

Adenosine-to-inosine (A-to-I) RNA editing, catalyzed by ADAR enzymes, is a prevalent and conserved RNA modification. While A-to-I RNA editing is essential in mammals, in Caenorhabditis elegans, it is not, making them invaluable for RNA editing research. In C. elegans, ADR-2 is the sole catalytic A-to-I editing enzyme, and ADR-1 is an RNA editing regulator. ADAR localization is well-studied in humans but not well-established in C. elegans. In this study, we examine the cellular and tissue-specific localization of ADR-2. We show that while ADR-2 is present in most cells in the embryo, at later developmental stages, its expression is both tissue- and cell-type-specific. Additionally, both ADARs are mainly in the nucleus. ADR-2 is adjacent to the chromosomes during the cell cycle. We show that the nuclear localization of endogenous ADR-2 depends on ADBP-1, not ADR-1. In adbp-1 mutant worms, ADR-2 is mislocalized, while ADR-1 is not, leading to decreased editing levels and de-novo editing, mostly in exons, suggesting that ADR-2 is also functional in the cytoplasm. Besides, mutated ADBP-1 affects gene expression. Furthermore, we show that ADR-2 targets adenosines with different surrounding nucleotides in exons and introns. Our findings indicate that ADR-2 cellular localization is highly regulated and affects its function.

Indexed as

Adenosine DeaminaseCaenorhabditis elegansCaenorhabditis elegans ProteinsCell NucleusRNA EditingAnimalsMutationRNA-Binding ProteinsSubstrate SpecificityAdenosine DeaminaseAdr-2 protein, C elegansCaenorhabditis elegans ProteinsRNA-Binding Proteins

Identifiers

PMID39036970
PMCPMC11381337

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.