Evidence map›Paper›PMID 39034322›Full record

ArticleNature communications2024

The genetic evolution of acral melanoma.

Meng Wang, Satoshi Fukushima, Yi-Shuan Sheen, Egle Ramelyte, Noel Cruz-Pacheco, Chenxu Shi, Shanshan Liu, Ishani Banik, Jamie D Aquino, Martin Sangueza Acosta and 7 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Article
  2. Molecular pathology in the diagnosis of cutaneous melanoma.Pathologie (Heidelberg, Germany) · 2026
    Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Poor efficacy of anti PD-1 antibody based immunotherapy in patients with acral melanoma: results from the Spanish Melanoma Group (GEM) registry.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2026
    Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. MAPK activity as a surrogate of acral melanoma immunogenicity?Journal of the European Academy of Dermatology and Venereology : JEADV · 2025
    Article
  14. Article
  15. Article
  16. Article
  17. Ancestry and somatic profile predict acral melanoma origin and prognosis.medRxiv : the preprint server for health sciences · 2025
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors.

Meng WangDepartment of Dermatology, University of California San Francisco, San Francisco, CA, USA.ORCID 0000-0003-3209-1026
Satoshi FukushimaDepartment of Dermatology and Plastic Surgery, Faculty of Life Sciences, Kumamoto University, Kumamoto, Japan.
Yi-Shuan SheenDepartment of Dermatology, National Taiwan University Hospital and National Taiwan University College of Medicine, Taipei, Taiwan.
Egle RamelyteDepartment of Dermatology, University of Zurich, Zurich, Switzerland.ORCID 0000-0001-8262-8608
Noel Cruz-PachecoDepartment of Dermatology, University of California San Francisco, San Francisco, CA, USA.ORCID 0000-0001-8989-7093
Chenxu ShiDepartment of Dermatology, University of California San Francisco, San Francisco, CA, USA.
Shanshan LiuDepartment of Dermatology, University of California San Francisco, San Francisco, CA, USA.
Ishani BanikDepartment of Dermatology, University of California San Francisco, San Francisco, CA, USA.
Jamie D AquinoDepartment of Pathology, University of California San Francisco, San Francisco, CA, USA.
Martin Sangueza AcostaHospital Obrero, Caja Nacional de Salud, La Paz, Bolivia.
Mitchell LevesqueDepartment of Dermatology, University of Zurich, Zurich, Switzerland.ORCID 0000-0001-5902-9420
Reinhard DummerDepartment of Dermatology, University of Zurich, Zurich, Switzerland.ORCID 0000-0002-2279-6906
Jau-Yu LiauDepartment of Dermatology, National Taiwan University Hospital and National Taiwan University College of Medicine, Taipei, Taiwan.
Chia-Yu ChuDepartment of Dermatology, National Taiwan University Hospital and National Taiwan University College of Medicine, Taipei, Taiwan.
A Hunter ShainDepartment of Dermatology, University of California San Francisco, San Francisco, CA, USA.ORCID 0000-0002-2999-9706
Iwei YehDepartment of Dermatology, University of California San Francisco, San Francisco, CA, USA.ORCID 0000-0002-3941-3561
Boris C BastianDepartment of Dermatology, University of California San Francisco, San Francisco, CA, USA. boris.bastian@ucsf.edu.ORCID 0000-0003-1836-6062

Funding

Molecular and immunologic evolution of melanomas from pre-neoplastic lesionsR35CA220481 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BASTIAN, BORIS C. · 2017 to 2023
$6.3M
The mutational mechanisms shaping melanocytes in human skinR01AR080626 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Alan Hunter Shain · 2023 to 2026
$1.6M
NCI NIH HHS R35 CA220481NIAMS NIH HHS R01 AR080626U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) 1R35CA220481
6 · The paper itself

Abstract

Acral melanoma is an aggressive type of melanoma with unknown origins. It is the most common type of melanoma in individuals with dark skin and is notoriously challenging to treat. We examine exome sequencing data of 139 tissue samples, spanning different progression stages, from 37 patients. We find that 78.4% of the melanomas display clustered copy number transitions with focal amplifications, recurring predominantly on chromosomes 5, 11, 12, and 22. These complex genomic aberrations are typically shared across all progression stages of individual patients. TERT activating alterations also arise early, whereas MAP-kinase pathway mutations appear later, an inverted order compared to the canonical evolution. The punctuated formation of complex aberrations and early TERT activation suggest a unique mutational mechanism that initiates acral melanoma. The marked intratumoral heterogeneity, especially concerning MAP-kinase pathway mutations, may partly explain the limited success of therapies for this melanoma subtype.

Indexed as

MelanomaMutationSkin NeoplasmsTelomeraseDNA Copy Number VariationsEvolution, MolecularExome SequencingFemaleHumansMaleMAP Kinase Signaling SystemTelomeraseTERT protein, human

Identifiers

PMID39034322
PMCPMC11271482

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.