Evidence map›Paper›PMID 39032394›Full record

ArticleNeural networks : the official journal of the International Neural Network Society2024

Deep network embedding with dimension selection.

Tianning Dong, Yan Sun, Faming Liang

Abstract read
In one paragraph

Article in Neural networks : the official journal of the International Neural Network Society, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Tianning DongDepartment of Statistics, Purdue University, West Lafayette, IN 47907, United States of America.
Yan SunDepartment of Statistics, Purdue University, West Lafayette, IN 47907, United States of America.
Faming LiangDepartment of Statistics, Purdue University, West Lafayette, IN 47907, United States of America. Electronic address: fmliang@purdue.edu.

Funding

An Imputation-Consistency Algorithm for Biomedical Complex Data AnalysisR01GM126089 · NIGMS · PURDUE UNIVERSITY · PI LIANG, FAMING · 2018 to 2021
$1.2M
Stochastic Deep Learning for Electronic Health Records: Localizing Learning with Massive and Fragmented DataR01GM152717 · NIGMS · PURDUE UNIVERSITY · PI LIANG, FAMING, WANG, XIAOFENG · 2023 to 2025
$600k
NIGMS NIH HHS R01 GM126089NIGMS NIH HHS R01 GM152717
6 · The paper itself

Abstract

Network embedding is a general-purpose machine learning technique that converts network data from non-Euclidean space to Euclidean space, facilitating downstream analyses for the networks. However, existing embedding methods are often optimization-based, with the embedding dimension determined in a heuristic or ad hoc way, which can cause potential bias in downstream statistical inference. Additionally, existing deep embedding methods can suffer from a nonidentifiability issue due to the universal approximation power of deep neural networks. We address these issues within a rigorous statistical framework. We treat the embedding vectors as missing data, reconstruct the network features using a sparse decoder, and simultaneously impute the embedding vectors and train the sparse decoder using an adaptive stochastic gradient Markov chain Monte Carlo (MCMC) algorithm. Under mild conditions, we show that the sparse decoder provides a parsimonious mapping from the embedding space to network features, enabling effective selection of the embedding dimension and overcoming the nonidentifiability issue encountered by existing deep embedding methods. Furthermore, we show that the embedding vectors converge weakly to a desired posterior distribution in the 2-Wasserstein distance, addressing the potential bias issue experienced by existing embedding methods. This work lays down the first theoretical foundation for network embedding within the framework of missing data imputation.

Indexed as

AlgorithmsMarkov ChainsNeural Networks, ComputerDeep LearningHumansMachine LearningMonte Carlo MethodDeep learningDimension selectionEmbeddingImputationSocial networkStochastic Gradient Markov chain Monte Carlo

Identifiers

PMID39032394
PMCPMC11408115

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.