Evidence map›Paper›PMID 39030420›Full record

ArticleNature chemistry2024

An evolved artificial radical cyclase enables the construction of bicyclic terpenoid scaffolds via an H-atom transfer pathway.

Dongping Chen, Xiang Zhang, Anastassia Andreevna Vorobieva, Ryo Tachibana, Alina Stein, Roman P Jakob, Zhi Zou, Damian Alexander Graf, Ang Li, Timm Maier and 2 more

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Article in Nature chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
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  6. 50 Years of Giese Reaction - a Personal View.Angewandte Chemie (International ed. in English) · 2026
    Review
  7. Article
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  9. Designing Enzymatic Reactivity with an Expanded Palette.Chembiochem : a European journal of chemical biology · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Dongping Chen *Department of Chemistry, University of Basel, Basel, Switzerland.ORCID 0000-0002-1537-1539
Xiang Zhang *Department of Chemistry, University of Basel, Basel, Switzerland.ORCID 0009-0001-8977-6459
Anastassia Andreevna VorobievaStructural Biology Brussels, Vrije Universiteit Brussel, Brussels, Belgium.ORCID 0000-0001-5554-1398
Ryo TachibanaDepartment of Chemistry, University of Basel, Basel, Switzerland.
Alina SteinNational Center of Competence in Research 'Molecular Systems Engineering', Basel, Switzerland.ORCID 0000-0002-2526-506X
Roman P JakobBiozentrum, University of Basel, Basel, Switzerland.ORCID 0000-0002-6451-8656
Zhi ZouDepartment of Chemistry, University of Basel, Basel, Switzerland.ORCID 0000-0002-0815-8561
Damian Alexander GrafDepartment of Chemistry, University of Basel, Basel, Switzerland.ORCID 0000-0002-0748-9297
Ang LiState Key Laboratory of Chemical Biology, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Shanghai, China.ORCID 0000-0002-8808-0636
Timm MaierBiozentrum, University of Basel, Basel, Switzerland.ORCID 0000-0002-7459-1363
Bruno E CorreiaInstitute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland. bruno.correia@epfl.ch.ORCID 0000-0002-7377-8636
Thomas R WardDepartment of Chemistry, University of Basel, Basel, Switzerland. thomas.ward@unibas.ch.ORCID 0000-0001-8602-5468

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

While natural terpenoid cyclases generate complex terpenoid structures via cationic mechanisms, alternative radical cyclization pathways are underexplored. The metal-catalysed H-atom transfer reaction (M-HAT) offers an attractive means for hydrofunctionalizing olefins, providing access to terpenoid-like structures. Artificial metalloenzymes offer a promising strategy for introducing M-HAT reactivity into a protein scaffold. Here we report our efforts towards engineering an artificial radical cyclase (ARCase), resulting from anchoring a biotinylated [Co(Schiff-base)] cofactor within an engineered chimeric streptavidin. After two rounds of directed evolution, a double mutant catalyses a radical cyclization to afford bicyclic products with a cis-5-6-fused ring structure and up to 97% enantiomeric excess. The involvement of a histidine ligation to the Co cofactor is confirmed by crystallography. A time course experiment reveals a cascade reaction catalysed by the ARCase, combining a radical cyclization with a conjugate reduction. The ARCase exhibits tolerance towards variations in the dienone substrate, highlighting its potential to access terpenoid scaffolds.

Indexed as

TerpenesBridged Bicyclo CompoundsCyclizationModels, MolecularProtein EngineeringBridged Bicyclo CompoundsTerpenes

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.