Evidence map›Paper›PMID 39029605›Full record

ArticleNeuroImage2024

Anatomically constrained tractography of the fetal brain.

Camilo Calixto, Camilo Jaimes, Matheus D Soldatelli, Simon K Warfield, Ali Gholipour, Davood Karimi

Abstract read
In one paragraph

Article in NeuroImage, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. A detailed spatiotemporal atlas of the white matter tracts for the fetal brain.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Article
  7. Advances in Fetal Brain Imaging.Magnetic resonance imaging clinics of North America · 2024
    Review
  8. White matter tract crossing and bottleneck regions in the fetal brain.bioRxiv : the preprint server for biology · 2024
    Article
  9. Article
  10. Diffusion MRI with Machine Learning.Imaging neuroscience (Cambridge, Mass.) · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Camilo CalixtoBoston Children's Hospital, 300 Longwood Ave, Boston, MA 02115, USA.
Camilo JaimesMassachusetts General Hospital, 55 Fruit St, Boston, MA 02114, USA.
Matheus D SoldatelliBoston Children's Hospital, 300 Longwood Ave, Boston, MA 02115, USA.
Simon K WarfieldBoston Children's Hospital, 300 Longwood Ave, Boston, MA 02115, USA.
Ali GholipourBoston Children's Hospital, 300 Longwood Ave, Boston, MA 02115, USA.
Davood KarimiBoston Children's Hospital, 300 Longwood Ave, Boston, MA 02115, USA. Electronic address: davood.karimi@childrens.harvard.edu.

Funding

Genetic Analysis and Manipulation Core (GAEC)P50HD105351 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI SCOTT Loren POMEROY, MUSTAFA SAHIN · 2021 to 2026
$9.4M
Next-generation in-vivo fetal neuroimagingR01EB031849 · NIBIB · UNIVERSITY OF CALIFORNIA-IRVINE · PI GHOLIPOUR-BABOLI, ALI · 2021 to 2024
$2.2M
Imaging early development of human neural circuitsR01HD109395 · NICHD · UNIVERSITY OF CALIFORNIA-IRVINE · PI ALI GHOLIPOUR-BABOLI · 2022 to 2026
$2.1M
Enhanced Imaging of the Fetal Brain MicrostructureR01EB032366 · NIBIB · UNIVERSITY OF CALIFORNIA-IRVINE · PI GHOLIPOUR-BABOLI, ALI · 2022 to 2025
$2.0M
Enabling the Assessment of Fetal Brain Development and Degeneration with Machine LearningR01NS128281 · NINDS · BOSTON CHILDREN'S HOSPITAL · PI Davood Karimi · 2023 to 2026
$1.8M
Advancing Microstructural and Vascular Neuroimaging in Perinatal StrokeR01NS106030 · NINDS · BOSTON CHILDREN'S HOSPITAL · PI WARFIELD, SIMON K · 2019 to 2023
$1.7M
Motion-robust super-resolution diffusion weighted MRI of early brain developmentR01EB018988 · NIBIB · BOSTON CHILDREN'S HOSPITAL · PI GHOLIPOUR-BABOLI, ALI · 2014 to 2017
$1.6M
Improved Quantitative Assessment of the Fetal Brain from 3D Volumetric MRIR01EB013248 · NIBIB · BOSTON CHILDREN'S HOSPITAL · PI WARFIELD, SIMON K · 2012 to 2015
$1.5M
Accurate, reliable, and interpretable machine learning for assessment of neonatal and pediatric brain micro-structureR01HD110772 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI Davood Karimi · 2023 to 2026
$1.5M
NIBIB NIH HHS R01 EB013248NIBIB NIH HHS R01 EB018988NIBIB NIH HHS R01 EB031849NIBIB NIH HHS R01 EB032366NICHD NIH HHS P50 HD105351NICHD NIH HHS R01 HD109395NICHD NIH HHS R01 HD110772NINDS NIH HHS R01 NS106030NINDS NIH HHS R01 NS128281
6 · The paper itself

Abstract

Diffusion-weighted Magnetic Resonance Imaging (dMRI) is increasingly used to study the fetal brain in utero. An important computation enabled by dMRI is streamline tractography, which has unique applications such as tract-specific analysis of the brain white matter and structural connectivity assessment. However, due to the low fetal dMRI data quality and the challenging nature of tractography, existing methods tend to produce highly inaccurate results. They generate many false streamlines while failing to reconstruct the streamlines that constitute the major white matter tracts. In this paper, we advocate for anatomically constrained tractography based on an accurate segmentation of the fetal brain tissue directly in the dMRI space. We develop a deep learning method to compute the segmentation automatically. Experiments on independent test data show that this method can accurately segment the fetal brain tissue and drastically improve the tractography results. It enables the reconstruction of highly curved tracts such as optic radiations. Importantly, our method infers the tissue segmentation and streamline propagation direction from a diffusion tensor fit to the dMRI data, making it applicable to routine fetal dMRI scans. The proposed method can facilitate the study of fetal brain white matter tracts with dMRI.

Indexed as

BrainDiffusion Tensor ImagingFetusWhite MatterDeep LearningDiffusion Magnetic Resonance ImagingFemaleHumansImage Processing, Computer-AssistedPregnancyDiffusion MRIFetal brainMachine learningTractography

Identifiers

PMID39029605
PMCPMC11382095

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.