Evidence map›Paper›PMID 39028407›Full record

ArticleVirus genes2024

The complete genome of equid herpesvirus-1 (EHV-1) field isolates from Argentina reveals an interspecific recombinant strain.

Rocio Lucia Tau, Ana Eugenia Marandino, Yanina Panzera, Florencia Alamos, Maria Aldana Vissani, Sonia Alejandra Romera, Ruben Pérez, Silvina Soledad Maidana

Abstract read
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Article in Virus genes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Rocio Lucia Tau *Institute of Virology and Technological Innovations, Dr Nicolas Repetto and De losReseros, IVIT (INTA-CONICET), 1686, Hurlingham, Buenos Aires, Argentina.
Ana Eugenia Marandino *Evolutionary Genetics Section, Faculty of Sciences, Institute of Biology, University of the Republic, Montevideo, Uruguay.
Yanina PanzeraEvolutionary Genetics Section, Faculty of Sciences, Institute of Biology, University of the Republic, Montevideo, Uruguay.
Florencia AlamosInstitute of Virology and Technological Innovations, Dr Nicolas Repetto and De losReseros, IVIT (INTA-CONICET), 1686, Hurlingham, Buenos Aires, Argentina.
Maria Aldana VissaniInstitute of Virology and Technological Innovations, Dr Nicolas Repetto and De losReseros, IVIT (INTA-CONICET), 1686, Hurlingham, Buenos Aires, Argentina.
Sonia Alejandra RomeraInstitute of Virology and Technological Innovations, Dr Nicolas Repetto and De losReseros, IVIT (INTA-CONICET), 1686, Hurlingham, Buenos Aires, Argentina.
Ruben PérezEvolutionary Genetics Section, Faculty of Sciences, Institute of Biology, University of the Republic, Montevideo, Uruguay.
Silvina Soledad MaidanaInstitute of Virology and Technological Innovations, Dr Nicolas Repetto and De losReseros, IVIT (INTA-CONICET), 1686, Hurlingham, Buenos Aires, Argentina. maidana.silvina@inta.gob.ar.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Equid alphaherpesvirus type 1 (EHV-1) infection can have devastating economic consequences in the horse industry due to large-scale outbreaks of abortions, perinatal foal mortality, and myeloencephalopathy. The present study analyzed the genome of two isolates obtained from aborted fetuses in Argentina, E/745/99 and E/1297/07. The E745/99 genome shares 98.2% sequence identity with Ab4, a reference EHV-1 strain. The E/1297/07 genome shares 99.8% identity with NY03, a recombinant strain containing part of ORF64 and part of the intergenic region from Equid alphaherpesvirus-4 (EHV-4). The E/1297/07 genome has the same breakpoints as other United States and Japanese recombinants, including NY03. The recombinant regions have varying numbers of tandem repeat sequences and different minor parental sequences (EHV-4), suggesting distinct origins of the recombinant events. These are the first complete genomes of EHV-1 from Argentina and South America available in the Databases.

Indexed as

Genome, ViralHerpesviridae InfectionsHerpesvirus 1, EquidPhylogenyAnimalsArgentinaDNA, ViralHorse DiseasesHorsesOpen Reading FramesRecombination, GeneticWhole Genome SequencingDNA, ViralArgentinaHerpesvirusHorseICP4Recombination

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.