Evidence map›Paper›PMID 39026853›Full record

ArticlebioRxiv : the preprint server for biology2025

HyperCas12a enables multiplexed CRISPRi screens.

Schuyler M Melore, Christian McRoberts Amador, Marisa C Hamilton, Charles A Gersbach, Timothy E Reddy

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Schuyler M MeloreUniversity Program in Genetics & Genomics, Duke University, Durham, NC, USA.ORCID 0000-0002-0694-6388
Christian McRoberts AmadorCenter for Advanced Genomic Technologies, Duke University, Durham, NC, USA.
Marisa C HamiltonUniversity Program in Genetics & Genomics, Duke University, Durham, NC, USA.ORCID 0000-0002-1132-9712
Charles A GersbachUniversity Program in Genetics & Genomics, Duke University, Durham, NC, USA.
Timothy E ReddyUniversity Program in Genetics & Genomics, Duke University, Durham, NC, USA.ORCID 0000-0002-7629-061X

Funding

The Duke FUNCTION Center: Pioneering the comprehensive identification of combinatorial noncoding causes of diseaseRM1HG011123 · NHGRI · DUKE UNIVERSITY · PI GREGORY E CRAWFORD, Raluca Gordan · 2020 to 2026
$21.9M
High-Throughput Functional Annotation of Gene Regulatory Elements and Variants Critical to Complex Cellular PhenotypesUM1HG012053 · NHGRI · DUKE UNIVERSITY · PI GREGORY E CRAWFORD, Charles A. Gersbach · 2021 to 2026
$10.7M
Beyond GWAS: High Throughput Functional Genomics & Epigenome Editing to Elucidate the Effects of Genetic Associations for SchizophreniaR01MH125236 · NIMH · DUKE UNIVERSITY · PI CRAWFORD, GREGORY E, GERSBACH, CHARLES A. · 2021 to 2025
$8.1M
Genetics and Genomics Training GrantT32GM136627 · NIGMS · DUKE UNIVERSITY · PI ALLISON E ASHLEY-KOCH · 2020 to 2026
$3.1M
Epigenetic Programming of T Cells for Enhanced Cellular ImmunotherapyR01CA289574 · NCI · DUKE UNIVERSITY · PI Charles A. Gersbach · 2024 to 2026
$1.7M
NCI NIH HHS R01 CA289574NHGRI NIH HHS RM1 HG011123NHGRI NIH HHS UM1 HG012053NIGMS NIH HHS T32 GM136627NIMH NIH HHS R01 MH125236
6 · The paper itself

Abstract

Interactions between multiple genes or cis-regulatory elements (CREs) underlie a wide range of biological processes in both health and disease. High-throughput screens using dCas9 fused to epigenome editing domains have allowed researchers to assess the impact of activation or repression of both coding and non-coding genomic regions on a phenotype of interest, but assessment of genetic interactions between those elements has been limited to pairs. Here, we combine a hyper-efficient version of

Identifiers

PMID39026853
PMCPMC11257430

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.