Evidence map›Paper›PMID 39026851›Full record

ArticlebioRxiv : the preprint server for biology2024

Heli-SMACC: Helicase-targeting SMAll Molecule Compound Collection.

Holli-Joi Martin, Mohammad A Hossain, James Wellnitz, Enes Kelestemur, Joshua E Hochuli, Sumera Parveen, Cheryl Arrowsmith, Timothy M Willson, Eugene Muratov, Alexander Tropsha

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Holli-Joi MartinUNC Eshelman School of Pharmacy, University of North Carolina, Chapel Hill, NC, USA.
Mohammad A HossainStructural Genomics Consortium, UNC Eshelman School of Pharmacy, University of North Carolina, Chapel Hill, NC, USA.ORCID 0000-0001-8684-8755
James WellnitzUNC Eshelman School of Pharmacy, University of North Carolina, Chapel Hill, NC, USA.
Enes KelestemurUNC Eshelman School of Pharmacy, University of North Carolina, Chapel Hill, NC, USA.
Joshua E HochuliUNC Eshelman School of Pharmacy, University of North Carolina, Chapel Hill, NC, USA.
Sumera ParveenThe Structural Genomics Consortium, University of Toronto, Canada.
Cheryl ArrowsmithThe Structural Genomics Consortium, University of Toronto, Canada.
Timothy M WillsonStructural Genomics Consortium, UNC Eshelman School of Pharmacy, University of North Carolina, Chapel Hill, NC, USA.ORCID 0000-0003-4181-8223
Eugene MuratovUNC Eshelman School of Pharmacy, University of North Carolina, Chapel Hill, NC, USA.ORCID 0000-0003-4616-7036
Alexander TropshaUNC Eshelman School of Pharmacy, University of North Carolina, Chapel Hill, NC, USA.

Funding

Research Project 1: Coronavirus antiviral lead development and combination testingU19AI171292 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BARIC, RALPH S, WILLSON, TIMOTHY M · 2022 to 2022
$65.5M
Enabling the Accelerated Discovery of Novel Chemical Probes by Integration of Crystallographic, Computational, and Synthetic Chemistry ApproachesR01GM140154 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI TROPSHA, ALEXANDER, WILLSON, TIMOTHY M · 2021 to 2024
$2.4M
UNC Chemical Biology Interface Training ProgramT32GM135122 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Jeffrey Aube · 2021 to 2026
$1.6M
NIAID NIH HHS U19 AI171292NIGMS NIH HHS R01 GM140154NIGMS NIH HHS T32 GM135122
6 · The paper itself

Abstract

Helicases have emerged as promising targets for the development of antiviral drugs; however, the family remains largely undrugged. To support the focused development of viral helicase inhibitors we identified, collected, and integrated all chemogenomics data for all available helicases from the ChEMBL database. After thoroughly curating and enriching the data with relevant annotations we have created a derivative database of helicase inhibitors which we dubbed Heli-SMACC (Helicase-targeting SMAll Molecule Compound Collection). The current version of Heli-SMACC contains 20,432 bioactivity entries for viral, human, and bacterial helicases. We have selected 30 compounds with promising viral helicase activity and tested them in a SARS-CoV-2 NSP13 ATPase assay. Twelve compounds demonstrated ATPase inhibition and a consistent dose-response curve. The Heli-SMACC database may serve as a reference for virologists and medicinal chemists working on the development of novel helicase inhibitors. Heli-SMACC is publicly available at https://smacc.mml.unc.edu.

Indexed as

Antiviral Drug DiscoveryDatabaseDrug RepurposingHelicasesViral Helicase Inhibitors

Identifiers

PMID39026851
PMCPMC11257486

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.