Evidence map›Paper›PMID 39026808›Full record

ArticlebioRxiv : the preprint server for biology2024

Malassezia responds to environmental pH signals through the conserved Rim/Pal pathway.

Kaila M Pianalto, Calla L Telzrow, Hannah Brown Harding, Jacob T Brooks, Joshua A Granek, Eduardo Gushiken-Ibañez, Salomé LeibundGut-Landmann, Joseph Heitman, Giuseppe Ianiri, J Andrew Alspaugh

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Kaila M PianaltoDepartments of Medicine, Duke University School of Medicine, Durham, NC, USA.
Calla L TelzrowDepartments of Medicine, Duke University School of Medicine, Durham, NC, USA.
Hannah Brown HardingDepartments of Medicine, Duke University School of Medicine, Durham, NC, USA.
Jacob T BrooksDepartment of Physics and Astronomy, University of North Carolina, Chapel Hill, NC, USA.
Joshua A GranekMolecular Genetics and Microbiology, Duke University School of Medicine, Durham, NC, USA.ORCID 0000-0003-3908-5016
Eduardo Gushiken-IbañezSection of Immunology at Vetsuisse Faculty, University of Zurich, Switzerland.
Salomé LeibundGut-LandmannSection of Immunology at Vetsuisse Faculty, University of Zurich, Switzerland.
Joseph HeitmanDepartments of Medicine, Duke University School of Medicine, Durham, NC, USA.
Giuseppe IaniriDepartment of Agricultural, Environmental and Food Sciences, Università degli Studi del Molise, Italy.ORCID 0000-0002-3278-8678
J Andrew AlspaughDepartments of Medicine, Duke University School of Medicine, Durham, NC, USA.ORCID 0000-0003-3009-627X

Funding

Coordinated Regulation of Virulence Genes in C. neoformansR01AI074677 · NIAID · DUKE UNIVERSITY · PI ALSPAUGH, ANDREW, WORMLEY, FLOYD L. · 2011 to 2020
$4.0M
Coordinated responses to host-derived stresses in C. neoformansR01AI175711 · NIAID · DUKE UNIVERSITY · PI ANDREW ALSPAUGH · 2023 to 2026
$1.5M
Coordinated Regulation of Virulence Genes in C. neoformansR56AI074677 · NIAID · DUKE UNIVERSITY · PI ALSPAUGH, ANDREW · 2009 to 2010
$608k
Malassezia and Candida auris: skin microbiome dysbiosis and de-regulation of cutaneous homeostasisR21AI168672 · NIAID · DUKE UNIVERSITY · PI HEITMAN, JOSEPH, LEIBUNDGUT-LANDMANN, SALOME · 2023 to 2024
$400k
NIAID NIH HHS R01 AI074677NIAID NIH HHS R01 AI175711NIAID NIH HHS R21 AI168672NIAID NIH HHS R56 AI074677
6 · The paper itself

Abstract

During mammalian colonization and infection, microorganisms must be able to rapidly sense and adapt to changing environmental conditions including alterations in extracellular pH. The fungus-specific Rim/Pal signaling pathway is one process that supports microbial adaptation to alkaline pH. This cascading series of interacting proteins terminates in the proteolytic activation of the highly conserved Rim101/PacC protein, a transcription factor that mediates microbial responses that favor survival in neutral/alkaline pH growth conditions, including many mammalian tissues. We identified the putative Rim pathway proteins Rim101 and Rra1 in the human skin colonizing fungus

Identifiers

PMID39026808
PMCPMC11257548

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.