Evidence map›Paper›PMID 39026750›Full record

ArticlebioRxiv : the preprint server for biology2025

Endogenous FGFs drive ERK-dependent cell fate patterning in 2D human gastruloids.

Kyoung Jo, Zong-Yuan Liu, Gauri Patel, Zhiyuan Yu, LiAng Yao, Seth Teague, Craig Johnson, Jason Spence, Idse Heemskerk

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Kyoung JoDepartment of Cell and Developmental Biology, University of Michigan Medical School, Ann Arbor, Michigan.
Zong-Yuan LiuDepartment of Cell and Developmental Biology, University of Michigan Medical School, Ann Arbor, Michigan.
Gauri PatelDepartment of Biomedical Engineering, University of Michigan, Ann Arbor, Michigan.
Zhiyuan YuDepartment of Computational Medicine and Bioinformatics, University of Michigan Medical School, Ann Arbor, Michigan.
LiAng YaoDepartment of Cell and Developmental Biology, University of Michigan Medical School, Ann Arbor, Michigan.
Seth TeagueDepartment of Biomedical Engineering, University of Michigan, Ann Arbor, Michigan.
Craig JohnsonDepartment of Cell and Developmental Biology, University of Michigan Medical School, Ann Arbor, Michigan.
Jason SpenceDepartment of Cell and Developmental Biology, University of Michigan Medical School, Ann Arbor, Michigan.ORCID 0000-0001-7869-3992
Idse HeemskerkDepartment of Cell and Developmental Biology, University of Michigan Medical School, Ann Arbor, Michigan.

Funding

Multifunctional morphogens: patterning precision and mesoderm migrationR35GM138346 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HEEMSKERK, IDSE JOANNES · 2020 to 2025
$4.3M
Dynamics of FGF and its integration with other pathways during human germ layer differentiationF32HD108980 · NICHD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI JO, KYOUNG HA · 2022 to 2023
$159k
NICHD NIH HHS F32 HD108980NIGMS NIH HHS R35 GM138346
6 · The paper itself

Abstract

The role of FGF is the least understood of the morphogens driving mammalian gastrulation. Here we investigated the function of FGF in a stem cell model for human gastrulation known as a 2D gastruloid. We found a ring of FGF-dependent ERK activity that closely follows the emergence of primitive streak (PS)-like cells but expands further inward. We showed that this ERK activity pattern is required for PS-like differentiation and that loss of PS-like cells upon FGF receptor inhibition can be rescued by directly activating ERK. We further demonstrated that the ERK-ring depends on localized activation of basolaterally positioned FGF receptors (FGFR) by endogenous FGF gradients. We confirmed and extended previous studies in analyzing expression of FGF pathway components, showing FGFR1 is the main receptor, FGF2 is highly expressed across several cell types, and FGF4/17 are the main FGF ligands expressed in the PS-like cells, similar to the human and monkey embryo but different from the mouse. We found that knockdown of FGF4 greatly reduced PS-like differentiation while FGF17 knockdown primarily affected subsequent mesoderm differentiation. FGF8 expression was spatially displaced from PS-markers and FGF4 expression and peaked earlier, while knockdown led to an expansion in PS-like cells, suggesting FGF8 may counteract FGF4 to limit PS-like differentiation. Thus, we have identified a previously unknown role for FGF-dependent ERK signaling in 2D gastruloids and possibly the human embryo, driven by a mechanism where FGF4 and FGF17 signal through basally localized FGFR1 to induce PS-like cells and their derivatives, potentially restricted by FGF8.

Identifiers

PMID39026750
PMCPMC11257619

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