Evidence map›Paper›PMID 39026528›Full record

ArticleClinical & translational immunology2024

Spatial proteomic profiling of tumor and stromal compartments in non-small-cell lung cancer identifies signatures associated with overall survival.

Vahid Yaghoubi Naei, James Monkman, Habib Sadeghirad, Ahmed Mehdi, Tony Blick, William Mullally, Ken O'Byrne, Majid Ebrahimi Warkiani, Arutha Kulasinghe

Abstract read
In one paragraph

Article in Clinical & translational immunology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Vahid Yaghoubi NaeiSchool of Biomedical Engineering University of Technology Sydney Sydney NSW Australia.
James MonkmanFrazer Institute, Faculty of Medicine The University of Queensland Brisbane QLD Australia.
Habib SadeghiradFrazer Institute, Faculty of Medicine The University of Queensland Brisbane QLD Australia.
Ahmed MehdiQueensland Cyber Infrastructure Foundation (QCIF) Ltd The University of Queensland Brisbane QLD Australia.
Tony BlickFrazer Institute, Faculty of Medicine The University of Queensland Brisbane QLD Australia.
William MullallyThe Princess Alexandra Hospital Brisbane QLD Australia.
Ken O'ByrneThe Princess Alexandra Hospital Brisbane QLD Australia.
Majid Ebrahimi WarkianiSchool of Biomedical Engineering University of Technology Sydney Sydney NSW Australia.
Arutha KulasingheFrazer Institute, Faculty of Medicine The University of Queensland Brisbane QLD Australia.ORCID https://orcid.org/0000-0003-3224-7350

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objectives: Non-small-cell lung carcinoma (NSCLC) is the most prevalent and lethal form of lung cancer. The need for biomarker-informed stratification of targeted therapies has underpinned the need to uncover the underlying properties of the tumor microenvironment (TME) through high-plex quantitative assays. Methods: In this study, we profiled resected NSCLC tissues from 102 patients by targeted spatial proteomics of 78 proteins across tumor, immune activation, immune cell typing, immune-oncology, drug targets, cell death and PI3K/AKT modules to identify the tumor and stromal signatures associated with overall survival (OS). Results: Survival analysis revealed that stromal CD56 (HR = 0.384, Conclusions: Deciphering the TME using high-plex spatially resolved methods is giving us new insights into compartmentalised tumor and stromal protein signatures associated with clinical endpoints in NSCLC.

Indexed as

digital spatial profilingnon‐small‐cell lung cancerspatial proteomicstumor microenvironment

Identifiers

PMID39026528
PMCPMC11257771

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.