Evidence map›Paper›PMID 39026012›Full record

ArticleEMBO reports2024

NS2 induces an influenza A RNA polymerase hexamer and acts as a transcription to replication switch.

Junqing Sun, Lu Kuai, Lei Zhang, Yufeng Xie, Yanfang Zhang, Yan Li, Qi Peng, Yuekun Shao, Qiuxian Yang, Wen-Xia Tian and 5 more

Erratum issuedAbstract read
In one paragraph

Article in EMBO reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Junqing Sun *College of Veterinary Medicine, Shanxi Agricultural University, Jinzhong, 030801, China.
Lu Kuai *CAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.ORCID 0000-0003-3828-8735
Lei Zhang *CAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
Yufeng XieCAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.ORCID 0000-0001-9602-0003
Yanfang ZhangCAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
Yan LiCAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
Qi PengCAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
Yuekun ShaoCAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
Qiuxian YangCAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
Wen-Xia TianCollege of Veterinary Medicine, Shanxi Agricultural University, Jinzhong, 030801, China. tianwx@sxau.edu.cn.ORCID 0000-0001-6018-5180
Junhao ZhuCAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
Jianxun QiCAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.ORCID 0000-0002-9358-4732
Yi ShiShanxi Academy of Advanced Research and Innovation, Taiyuan, 030032, China. shiyi@im.ac.cn.ORCID 0000-0002-3053-2687
Tao DengCAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China. dengt@im.ac.cn.ORCID 0000-0002-8303-0891
George F GaoCollege of Veterinary Medicine, Shanxi Agricultural University, Jinzhong, 030801, China. gaof@im.ac.cn.ORCID 0000-0002-3869-615X

Funding

| Beijing Municipal Natural Science Foundation () M22031MOST | National Key Research and Development Program of China (NKPs) 2021YFC2300700MOST | National Key Research and Development Program of China (NKPs) 2022YFF1203200MOST | National Natural Science Foundation of China (NSFC) 31870160MOST | National Natural Science Foundation of China (NSFC) 32070173MOST | National Natural Science Foundation of China (NSFC) 32100119MOST | National Natural Science Foundation of China (NSFC) 32192452MOST | National Natural Science Foundation of China (NSFC) 81871658Shanxi Key R&D Program 202102130501001Strategic Priority Research Program of CAS XDB29010000The Earmarked Fund for Shanxi Agriculture Research System 2023-07The Earmarked Fund for Shanxi Agriculture Research System 2024CYJSTX15The Special Fund for Science and Technology Innovation Teams of Shanxi Province 202204051001022
6 · The paper itself

Abstract

Genome transcription and replication of influenza A virus (FluA), catalyzed by viral RNA polymerase (FluAPol), are delicately controlled across the virus life cycle. A switch from transcription to replication occurring at later stage of an infection is critical for progeny virion production and viral non-structural protein NS2 has been implicated in regulating the switch. However, the underlying regulatory mechanisms and the structure of NS2 remained elusive for years. Here, we determine the cryo-EM structure of the FluAPol-NS2 complex at ~3.0 Å resolution. Surprisingly, three domain-swapped NS2 dimers arrange three symmetrical FluPol dimers into a highly ordered barrel-like hexamer. Further structural and functional analyses demonstrate that NS2 binding not only hampers the interaction between FluAPol and the Pol II CTD because of steric conflicts, but also impairs FluAPol transcriptase activity by stalling it in the replicase conformation. Moreover, this is the first visualization of the full-length NS2 structure. Our findings uncover key molecular mechanisms of the FluA transcription-replication switch and have implications for the development of antivirals.

Indexed as

Influenza A virusViral Nonstructural ProteinsVirus ReplicationCryoelectron MicroscopyDNA-Directed RNA PolymerasesHumansModels, MolecularProtein BindingProtein MultimerizationTranscription, GeneticViral TranscriptionDNA-Directed RNA PolymerasesViral Nonstructural ProteinsFluAPolFluAPol-NS2 ComplexInfluenza A VirusNS2Transcription to Replication Switch

Identifiers

PMID39026012
PMCPMC11549089

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.