Evidence map›Paper›PMID 39025848›Full record

ArticleNature communications2024

Iron rescues glucose-mediated photosynthesis repression during lipid accumulation in the green alga Chromochloris zofingiensis.

Tim L Jeffers, Samuel O Purvine, Carrie D Nicora, Ryan McCombs, Shivani Upadhyaya, Adrien Stroumza, Ken Whang, Sean D Gallaher, Alice Dohnalkova, Sabeeha S Merchant and 3 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. A distinct LHCI arrangement is recruited to photosystem I in Fe-starved green algae.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
  8. Article
  9. Green microalgaFrontiers in microbiology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Tim L JeffersDepartment of Plant and Microbial Biology, University of California, Berkeley, CA, 94720, USA.
Samuel O PurvineEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, WA, 99354, USA.ORCID 0000-0002-2257-2400
Carrie D NicoraBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, 99354, USA.ORCID 0000-0003-2461-9548
Ryan McCombsDepartment of Plant and Microbial Biology, University of California, Berkeley, CA, 94720, USA.ORCID 0009-0004-8879-6775
Shivani UpadhyayaDepartment of Plant and Microbial Biology, University of California, Berkeley, CA, 94720, USA.ORCID 0000-0002-3330-4305
Adrien StroumzaDepartment of Plant and Microbial Biology, University of California, Berkeley, CA, 94720, USA.
Ken WhangDepartment of Plant and Microbial Biology, University of California, Berkeley, CA, 94720, USA.
Sean D GallaherUCLA DOE Institute for Genomics and Proteomics, University of California, Los Angeles, CA, 90095, USA.ORCID 0000-0002-9773-6051
Alice DohnalkovaEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, WA, 99354, USA.ORCID 0000-0003-1578-4015
Sabeeha S MerchantDepartment of Plant and Microbial Biology, University of California, Berkeley, CA, 94720, USA.ORCID 0000-0002-2594-509X
Mary LiptonEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, WA, 99354, USA.ORCID 0000-0001-7749-0077
Krishna K NiyogiDepartment of Plant and Microbial Biology, University of California, Berkeley, CA, 94720, USA. niyogi@berkeley.edu.ORCID 0000-0001-7229-2071
Melissa S RothDepartment of Plant and Microbial Biology, University of California, Berkeley, CA, 94720, USA. mroth@berkeley.edu.ORCID 0000-0001-7389-5982

Funding

U.S. Department of Energy (DOE) DE-SC0018301
6 · The paper itself

Abstract

Energy status and nutrients regulate photosynthetic protein expression. The unicellular green alga Chromochloris zofingiensis switches off photosynthesis in the presence of exogenous glucose (+Glc) in a process that depends on hexokinase (HXK1). Here, we show that this response requires that cells lack sufficient iron (-Fe). Cells grown in -Fe+Glc accumulate triacylglycerol (TAG) while losing photosynthesis and thylakoid membranes. However, cells with an iron supplement (+Fe+Glc) maintain photosynthesis and thylakoids while still accumulating TAG. Proteomic analysis shows that known photosynthetic proteins are most depleted in heterotrophy, alongside hundreds of uncharacterized, conserved proteins. Photosynthesis repression is associated with enzyme and transporter regulation that redirects iron resources to (a) respiratory instead of photosynthetic complexes and (b) a ferredoxin-dependent desaturase pathway supporting TAG accumulation rather than thylakoid lipid synthesis. Combining insights from diverse organisms from green algae to vascular plants, we show how iron and trophic constraints on metabolism aid gene discovery for photosynthesis and biofuel production.

Indexed as

ChlorophytaGlucoseIronLipid MetabolismPhotosynthesisTriglyceridesChlorophyceaeHexokinaseProteomicsThylakoidsGlucoseHexokinaseIronTriglycerides

Identifiers

PMID39025848
PMCPMC11258321

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.