Evidence map›Paper›PMID 39024233›Full record

ArticlePloS one2024

Genome-wide identification and expression analysis of TPP gene family under salt stress in peanut (Arachis hypogaea L.).

Yanfeng Zhang, Minxuan Cao, Qiuzhi Li, Fagang Yu

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Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Yanfeng ZhangCollege of Agriculture, Nanjing Agricultural University, Nanjing, Jiangsu, China.ORCID 0000-0002-6784-2574
Minxuan CaoCollege of Agriculture & Biotechnology, Zhejiang University, Hangzhou, Zhejiang, China.
Qiuzhi LiLiaocheng Academy of Agricultural Sciences, Liaocheng, Shandong, China.
Fagang YuLiaocheng Academy of Agricultural Sciences, Liaocheng, Shandong, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Trehalose-6-phosphate phosphatase (TPP), a key enzyme for trehalose biosynthesis in plants, plays a pivotal role in the growth and development of higher plants, as well as their adaptations to various abiotic stresses. Employing bioinformatics techniques, 45 TPP genes distributed across 17 chromosomes were identified with conserved Trehalose-PPase domains in the peanut genome, aiming to screen those involved in salt tolerance. Collinearity analysis showed that 22 TPP genes from peanut formed homologous gene pairs with 9 TPP genes from Arabidopsis and 31 TPP genes from soybean, respectively. Analysis of cis-acting elements in the promoters revealed the presence of multiple hormone- and abiotic stress-responsive elements in the promoter regions of AhTPPs. Expression pattern analysis showed that members of the TPP gene family in peanut responded significantly to various abiotic stresses, including low temperature, drought, and nitrogen deficiency, and exhibited certain tissue specificity. Salt stress significantly upregulated AhTPPs, with a higher number of responsive genes observed at the seedling stage compared to the podding stage. The intuitive physiological effect was reflected in the significantly higher accumulation of trehalose content in the leaves of plants under salt stress compared to the control. These findings indicate that the TPP gene family plays a crucial role in peanut's response to abiotic stresses, laying the foundation for further functional studies and utilization of these genes.

Indexed as

ArachisGene Expression Regulation, PlantMultigene FamilySalt StressGene Expression ProfilingGenome, PlantPhosphoric Monoester HydrolasesPhylogenyPlant ProteinsPromoter Regions, GeneticSalt ToleranceStress, PhysiologicalTrehalosePhosphoric Monoester HydrolasesPlant ProteinsTrehalosetrehalose-phosphatase

Identifiers

PMID39024233
PMCPMC11257338

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.