Evidence map›Paper›PMID 39024115›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Direct observation correlates NFκB cRel in B cells with activating and terminating their proliferative program.

Haripriya Vaidehi Narayanan, Mark Y Xiang, Yijia Chen, Helen Huang, Sukanya Roy, Himani Makkar, Alexander Hoffmann, Koushik Roy

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Computational modelling of aggressive B-cell lymphoma.Biochemical Society transactions · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Haripriya Vaidehi NarayananSignaling Systems Laboratory, Department of Microbiology, Immunology, and Molecular Genetics, University of California Los Angeles, Los Angeles, CA 90095.ORCID 0000-0001-8220-0724
Mark Y XiangSignaling Systems Laboratory, Department of Microbiology, Immunology, and Molecular Genetics, University of California Los Angeles, Los Angeles, CA 90095.
Yijia ChenSignaling Systems Laboratory, Department of Microbiology, Immunology, and Molecular Genetics, University of California Los Angeles, Los Angeles, CA 90095.ORCID 0000-0003-2460-8734
Helen HuangSignaling Systems Laboratory, Department of Microbiology, Immunology, and Molecular Genetics, University of California Los Angeles, Los Angeles, CA 90095.ORCID 0000-0002-6308-346X
Sukanya RoyDivision of Microbiology and Immunology, Department of Pathology, University of Utah, Salt Lake City, UT 84112.ORCID 0009-0000-8191-1364
Himani MakkarDivision of Microbiology and Immunology, Department of Pathology, University of Utah, Salt Lake City, UT 84112.ORCID 0009-0004-0439-5342
Alexander HoffmannSignaling Systems Laboratory, Department of Microbiology, Immunology, and Molecular Genetics, University of California Los Angeles, Los Angeles, CA 90095.ORCID 0000-0002-5607-3845
Koushik RoyDivision of Microbiology and Immunology, Department of Pathology, University of Utah, Salt Lake City, UT 84112.ORCID 0000-0003-1818-9027

Funding

Cell decision underlying B-cell immune responsesR01AI132731 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI HOFFMANN, ALEXANDER · 2018 to 2022
$2.2M
The NFkB System in Dendritic CellsR01AI127867 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI HOFFMANN, ALEXANDER · 2018 to 2022
$2.2M
Role of the NFkB signaling network in generating memory B cell and long-lived plasma cellR56AI177789 · NIAID · UNIVERSITY OF UTAH · PI ROY, KOUSHIK · 2024 to 2024
$298k
American Society of Hematology (ASH) Scholar AwardDamon Runyon Cancer Research Foundation (DRCRF) DRQ11-21HHS | NIH (NIH) R01AI127867HHS | NIH (NIH) R01AI132731James S. McDonnell Foundation (JSMF) N/ANIAID NIH HHS R01 AI127867NIAID NIH HHS R01 AI132731NIAID NIH HHS R56 AI177789The University of Utah, Department of Pathology N/A
6 · The paper itself

Abstract

Antibody responses require the proliferative expansion of B cells controlled by affinity-dependent signals. Yet, proliferative bursts are heterogeneous, varying between 0 and 8 divisions in response to the same stimulus. NFκB cRel is activated in response to immune stimulation in B cells and is genetically required for proliferation. Here, we asked whether proliferative heterogeneity is controlled by natural variations in cRel abundance. We developed a fluorescent reporter mTFP1-cRel for the direct observation of cRel in live proliferating B cells. We found that cRel is heterogeneously distributed among naïve B cells, which are enriched for high expressors in a heavy-tailed distribution. We found that high cRel expressors show faster activation of the proliferative program, but do not sustain it well, with population expansion decaying earlier. With a mathematical model of the molecular network, we showed that cRel heterogeneity arises from balancing positive feedback by autoregulation and negative feedback by its inhibitor IκBε, confirmed by mouse knockouts. Using live-cell fluorescence microscopy, we showed that increased cRel primes B cells for early proliferation via higher basal expression of the cell cycle driver cMyc. However, peak cMyc induction amplitude is constrained by incoherent feedforward regulation, decoding the fold change of cRel activity to terminate the proliferative burst. This results in a complex nonlinear, nonmonotonic relationship between cRel expression and the extent of proliferation. These findings emphasize the importance of direct observational studies to complement gene knockout results and to learn about quantitative relationships between biological processes and their key regulators in the context of natural variations.

Indexed as

B-LymphocytesCell ProliferationNF-kappa BAnimalsMiceMice, Inbred C57BLMice, KnockoutProto-Oncogene Proteins c-relNF-kappa BProto-Oncogene Proteins c-relB cell proliferationcell-to-cell heterogeneitycRel fluorescent reporterdirect observationIκBε negative feedback

Identifiers

PMID39024115
PMCPMC11287273

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.