Evidence map›Paper›PMID 39022346›Full record

ArticleNAR molecular medicine2024

Unlocking precision gene therapy: harnessing AAV tropism with nanobody swapping at capsid hotspots.

Mareike D Hoffmann, Joseph P Gallant, Aaron M LeBeau, Daniel Schmidt

Abstract read
In one paragraph

Article in NAR molecular medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Advances in AAV capsid engineering: Integrating rational design, directed evolution and machine learning.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Review
  5. Gene regulation technologies for gene and cell therapy.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Review
  6. Article
  7. Article
  8. Protein Carrier AAV.bioRxiv : the preprint server for biology · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Mareike D HoffmannDepartment of Genetics, Cell Biology & Development, University of Minnesota, Minneapolis, MN 55455, USA.ORCID https://orcid.org/0000-0001-8377-1385
Joseph P GallantDepartment of Pathology and Laboratory Medicine, University of Wisconsin School of Medicine and Public Health, Madison, WI 53792, USA.
Aaron M LeBeauDepartment of Pathology and Laboratory Medicine, University of Wisconsin School of Medicine and Public Health, Madison, WI 53792, USA.
Daniel SchmidtDepartment of Genetics, Cell Biology & Development, University of Minnesota, Minneapolis, MN 55455, USA.ORCID https://orcid.org/0000-0001-7609-4873

Funding

Viral Innovation CoreP30DA048742 · NIDA · UNIVERSITY OF MINNESOTA · PI Mark John Thomas · 2020 to 2026
$19.0M
Viral vector technology for cell type specific gene deliveryR01GM141152 · NIGMS · UNIVERSITY OF MINNESOTA · PI SCHMIDT, DANIEL · 2022 to 2025
$1.5M
Proof of concept studies for in vivo produced CAR-T cells that target B cell follicles as a treatment for HIVR41AI184054 · NIAID · MARPAM PHARMA, LLC · PI ATHANASIOU, MARIA CONSTANCE, SCHMIDT, DANIEL · 2024 to 2024
$302k
NIAID NIH HHS R41 AI184054NIDA NIH HHS P30 DA048742NIGMS NIH HHS R01 GM141152
6 · The paper itself

Abstract

Adeno-associated virus (AAV) has been remarkably successful in the clinic, but its broad tropism is a practical limitation of precision gene therapy. A promising path to engineer AAV tropism is the addition of binding domains to the AAV capsid that recognize cell surface markers present on a targeted cell type. We have recently identified two previously unexplored capsid regions near the 2/5-fold wall and 5-fold pore of the AAV capsid that are amenable to insertion of larger protein domains, including nanobodies. Here, we demonstrate that these hotspots facilitate AAV tropism switching through simple nanobody replacement without extensive optimization in both VP1 and VP2. Our data suggest that engineering VP2 is the preferred path for maintaining both virus production yield and infectivity. We demonstrate highly specific targeting of human cancer cells expressing fibroblast activating protein (FAP). Furthermore, we found that the combination of FAP nanobody insertion plus ablation of the heparin binding domain can reduce off-target infection to a minimum, while maintaining a strong infection of FAP receptor-positive cells. Taken together, our study shows that nanobody swapping at multiple capsid locations is a viable strategy for nanobody-directed cell-specific AAV targeting.

Identifiers

PMID39022346
PMCPMC11250487

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.