Evidence map›Paper›PMID 39020180›Full record

ArticleNature2024

A eukaryotic-like ubiquitination system in bacterial antiviral defence.

Lydia R Chambers, Qiaozhen Ye, Jiaxi Cai, Minheng Gong, Hannah E Ledvina, Huilin Zhou, Aaron T Whiteley, Raymond T Suhandynata, Kevin D Corbett

Abstract read
In one paragraph

Article in Nature, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Lydia R Chambers *Department of Chemistry and Biochemistry, University of California San Diego, La Jolla, CA, USA.
Qiaozhen Ye *Department of Cellular and Molecular Medicine, University of California San Diego, La Jolla, CA, USA.ORCID 0000-0002-3942-4121
Jiaxi CaiDepartment of Bioengineering, University of California San Diego, La Jolla, CA, USA.ORCID 0000-0002-4487-5613
Minheng GongDepartment of Cellular and Molecular Medicine, University of California San Diego, La Jolla, CA, USA.
Hannah E LedvinaDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO, USA.
Huilin ZhouDepartment of Cellular and Molecular Medicine, University of California San Diego, La Jolla, CA, USA.ORCID 0000-0002-1350-4430
Aaron T WhiteleyDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO, USA.ORCID 0000-0002-0075-7519
Raymond T SuhandynataSchool of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, USA.
Kevin D CorbettDepartment of Cellular and Molecular Medicine, University of California San Diego, La Jolla, CA, USA. kcorbett@ucsd.edu.ORCID 0000-0001-5854-2388

Funding

User Training and OutreachP30GM124165 · NIGMS · CORNELL UNIVERSITY · PI STEVEN E EALICK · 2018 to 2026
$34.2M
Molecular Biophysics Training Grant at UC San DiegoT32GM139795 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Galia Debelouchina, ELIZABETH A. KOMIVES · 2021 to 2026
$3.0M
Molecular mechanisms of nucleic acid recognition and maintenance in meiosis and innate immunityR35GM144121 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Kevin Daniel Corbett · 2022 to 2026
$2.7M
Suppression of duplication-mediated genome rearrangements by protein sumoylationR01GM116897 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ZHOU, HUILIN · 2015 to 2023
$2.6M
Research Supplements to Promote Diversity in Health-Related Research (Admin Supp - Clinical Trial Not Allowed)DP2AT012346 · NCCIH · UNIVERSITY OF COLORADO · PI WHITELEY, AARON THOMAS · 2022 to 2025
$2.4M
Pixel Array Detector for Macromolecular CrystallographyS10OD021527 · OD · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2016 to 2016
$2.0M
Kinetochore Assembly and RegulationR01GM151191 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Arshad Desai, Raymond Theodore Suhandynata · 2023 to 2026
$1.8M
Orbitrap Fusion Mass SpectrometerS10OD023498 · OD · LUDWIG INSTITUTE FOR CANCER RES LTD · PI ZHOU, HUILIN · 2017 to 2017
$600k
NCCIH NIH HHS DP2 AT012346NIGMS NIH HHS P30 GM124165NIGMS NIH HHS R01 GM116897NIGMS NIH HHS R01 GM151191NIGMS NIH HHS R35 GM144121NIGMS NIH HHS T32 GM139795NIH HHS S10 OD021527NIH HHS S10 OD023498
6 · The paper itself

Abstract

Ubiquitination pathways have crucial roles in protein homeostasis, signalling and innate immunity

Indexed as

Bacterial ProteinsBacteriophagesEscherichiaUbiquitin-Activating EnzymesUbiquitinationUbiquitin-Conjugating EnzymesUbiquitinsCatalytic DomainCrystallography, X-RayCysteineDeubiquitinating EnzymesEukaryotaEvolution, MolecularLysineModels, MolecularOperonBacterial ProteinsCysteineDeubiquitinating EnzymesLysineUbiquitin-Activating EnzymesUbiquitin-Conjugating EnzymesUbiquitins

Identifiers

PMID39020180
PMCPMC11476048

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.