Evidence map›Paper›PMID 39019785›Full record

ArticleZhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences2024

Identification of ceRNA networks in type H and L vascular endothelial cells through integrated bioinformatics methods.

Zhi Liu, Zhe Ruan, Haitao Long, Ruibo Zhao, Yong Zhu, Zhangyuan Lin, Peng Chen, Shushan Zhao

Abstract read
In one paragraph

Article in Zhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Zhi LiuDepartment of Orthopaedics, Xiangya Hospital, Central South University, Changsha 410008. liuzhi990107@163.com.
Zhe RuanDepartment of Orthopaedics, Xiangya Hospital, Central South University, Changsha 410008. zheruan@csu.edu.cn.
Haitao LongDepartment of Orthopaedics, Xiangya Hospital, Central South University, Changsha 410008.
Ruibo ZhaoDepartment of Orthopaedics, Xiangya Hospital, Central South University, Changsha 410008.
Yong ZhuDepartment of Orthopaedics, Xiangya Hospital, Central South University, Changsha 410008.
Zhangyuan LinDepartment of Orthopaedics, Xiangya Hospital, Central South University, Changsha 410008.
Peng ChenDepartment of Orthopaedics, Xiangya Hospital, Central South University, Changsha 410008. chenpeng150@csu.edu.cn.
Shushan ZhaoDepartment of Orthopaedics, Xiangya Hospital, Central South University, Changsha 410008. shushanzhao@csu.edu.cn.

Funding

the National Natural Science Foundation 81902222
6 · The paper itself

Abstract

objectivesType H blood vessels are a subtype of bone-specific microvessels (CD31

methodsWe downloaded relevant raw data from the ArrayExpress and the Gene Expression Omnibus (GEO) database and used the Limma R-Bioconductor package to screen for DE lncRNAs, DE miRNAs, and DE mRNAs between type H and L vascular ECs. A total ceRNA network was constructed based on their interactions, followed by refinement using protein-protein interaction (PPI) networks to select upregulated and downregulated key genes. Enrichment analysis was performed on these key genes. Random validation was conducted using flow cytometry and real-time RT-PCR.

resultsA total of 1 761 DE mRNAs, 187 DE lncRNAs, and 159 DE miRNAs were identified, and a comprehensive ceRNA network was constructed based on their interactions. Six upregulated (

conclusionsThis study proposes a ceRNA network associated with upregulated and downregulated type H and L vascular ECs based on selected key genes, providing new insights into the regulatory mechanisms of type H and L vascular ECs in bone metabolism.

Indexed as

Computational BiologyEndothelial CellsGene Regulatory NetworksMicroRNAsRNA, MessengerGene Expression ProfilingHumansMicrovesselsProtein Interaction MapsRNA, Competitive EndogenousRNA, Long NoncodingMicroRNAsRNA, Competitive EndogenousRNA, Long NoncodingRNA, Messengerbioinformaticsbone vesselsceRNA networktype H vascular endothelial cells

Identifiers

PMID39019785
PMCPMC11255190

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.