ArticleGenome biology and evolution2024
Chromosome-Level Genome Assembly of the Viviparous Eelpout Zoarces viviparus.
Article in Genome biology and evolution, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
4 citing papers in PubMed.
- A Complete Telomere-To-Telomere Assembly ofEvolutionary applications · 2026Article
- Sequencing and phylogenetic analysis of the mitochondrial genome of the albino Northern snakehead,Mitochondrial DNA. Part B, Resources · 2026Article
- Chromosome-level genome assembly of an Arctic fish species pale eelpout (Lycodes pallidus).Scientific data · 2025Article
- The many origins of extremophile fishes.Proceedings. Biological sciences · 2025Article
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7 authors.
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Abstract
The viviparous eelpout Zoarces viviparus is a common fish across the North Atlantic and has successfully colonized habitats across environmental gradients. Due to its wide distribution and predictable phenotypic responses to pollution, Z. viviparus is used as an ideal marine bioindicator organism and has been routinely sampled over decades by several countries to monitor marine environmental health. Additionally, this species is a promising model to study adaptive processes related to environmental change, specifically global warming. Here, we report the chromosome-level genome assembly of Z. viviparus, which has a size of 663 Mb and consists of 607 scaffolds (N50 = 26 Mb). The 24 largest represent the 24 chromosomes of the haploid Z. viviparus genome, which harbors 98% of the complete Benchmarking Universal Single-Copy Orthologues defined for ray-finned fish, indicating that the assembly is highly contiguous and complete. Comparative analyses between the Z. viviparus assembly and the chromosome-level genomes of two other eelpout species revealed a high synteny, but also an accumulation of repetitive elements in the Z. viviparus genome. Our reference genome will be an important resource enabling future in-depth genomic analyses of the effects of environmental change on this important bioindicator species.
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