Evidence map›Paper›PMID 39017772›Full record

ArticleJournal of assisted reproduction and genetics2024

Male infertility is associated with differential DNA methylation signatures of the imprinted gene GNAS and the non-imprinted gene CEP41.

Suheyla Esra Ozkocer, Ismail Guler, Asiye Ugras Dikmen, Nuray Bozkurt, Nuray Varol, Ece Konac

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In one paragraph

Article in Journal of assisted reproduction and genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Suheyla Esra OzkocerDepartment of Medical Biology and Genetics, Institute of Health Sciences, Gazi University, Kavaklıdere Çankaya, 06540, Ankara, Turkey.ORCID http://orcid.org/0000-0002-6413-1988
Ismail GulerDepartment of Obstetrics and Gynecology, Faculty of Medicine, Gazi University, Besevler, 06500, Ankara, Turkey.ORCID http://orcid.org/0000-0002-8098-2483
Asiye Ugras DikmenDepartment of Public Health, Faculty of Medicine, Gazi University, Besevler, 06500, Ankara, Turkey.ORCID http://orcid.org/0000-0002-3204-7562
Nuray BozkurtDepartment of Obstetrics and Gynecology, Faculty of Medicine, Gazi University, Besevler, 06500, Ankara, Turkey.ORCID http://orcid.org/0000-0002-1107-9629
Nuray VarolDepartment of Medical Biology, Faculty of Medicine, Gazi University, Besevler, 06500, Ankara, Turkey.ORCID http://orcid.org/0000-0002-5002-943X
Ece KonacDepartment of Medical Biology and Genetics, Institute of Health Sciences, Gazi University, Kavaklıdere Çankaya, 06540, Ankara, Turkey. ecemercanoglu@yahoo.com.ORCID http://orcid.org/0000-0001-5129-2515

Funding

Gazi Üniversitesi TDK-2021-7023
6 · The paper itself

Abstract

purposeTo investigate whether the DNA methylation profiles of GNAS(20q13.32), MEST(7q32.2), MESTIT1(7q32.2), IGF2(11p15.5), H19 (7q32.2), and CEP41(7q32.2) genes are related to the transcriptomic and epigenomic etiology of male infertility.

methodsThe DNA methylation levels of spermatozoa were obtained from fertile (n = 30), oligozoospermic (n = 30), and men with normal sperm count (n = 30). The methylation status of each CpG site was categorized as hypermethylated or hypomethylated. Expression levels of target gene transcripts were determined using real-time PCR.

resultsThe oligozoospermia showed a higher frequency of hypermethylation at GNASAS 1st, 3rd, and 5th CpG dinucleotides (66.7%, 73.3%, 73.3%) compared to the fertile group (33.3%, 33.3%, 40%, respectively). The normal sperm count exhibited a higher frequency of hypermethylation at the 3rd CpG of CEP41 (46.7%) than the fertile group (16.7%). Normal sperm count was predicted by CEP41 hypermethylation (OR = 1.750, 95%CI 1.038-2.950) and hypermethylation of both CEP41 and GNASAS (OR = 2.389, 95%CI 1.137-5.021). Oligozoospermia was predicted solely by GNASAS hypermethylation (OR = 2.460, 95%CI 1.315-4.603). In sperms with decreased IGF2 expression in the fertile group, we observed hypomethylation in the 2nd CpG of IGF2 antisense (IFG2AS), and hypermethylation in the 1st, 2nd, and 4th CpGs of H19. No significant relationship was found between IGF2 expression and methylation status of IGF2AS and H19 in infertile groups.

conclusionThe disappearance of the relationship between IGF2 expression and IGF2AS and H19 methylations in the infertile group provides new information regarding the disruption of epigenetic programming during spermatogenesis. A better understanding of sperm GNASAS and CEP41 hypermethylation could advance innovative diagnostic markers for male infertility.

Indexed as

ChromograninsDNA MethylationGenomic ImprintingGTP-Binding Protein alpha Subunits, GsInfertility, MaleOligospermiaAdultCpG IslandsEpigenesis, GeneticHumansInsulin-Like Growth Factor IIMaleRNA, Long NoncodingSpermatozoaSperm CountChromograninsGNAS protein, humanGTP-Binding Protein alpha Subunits, GsH19 long non-coding RNAIGF2 protein, humanInsulin-Like Growth Factor IIRNA, Long NoncodingCEP41DNA methylationEpigeneticExpression levelsGNASASMale infertility

Identifiers

PMID39017772
PMCPMC11405554

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.