Evidence map›Paper›PMID 39014105›Full record

ArticleCommunications biology2024

Insights into mechanisms of MALT1 allostery from NMR and AlphaFold dynamic analyses.

Johan Wallerstein, Xiao Han, Maria Levkovets, Dmitry Lesovoy, Daniel Malmodin, Claudio Mirabello, Björn Wallner, Renhua Sun, Tatyana Sandalova, Peter Agback and 4 more

Abstract read
In one paragraph

Article in Communications biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Johan WallersteinDepartment of Chemistry and Molecular Biology, University of Gothenburg, Box 465, SE-40530, Gothenburg, Sweden.
Xiao HanScience for Life Laboratory, Department of Medicine, Solna, Karolinska Institute, SE-17165, Solna, Sweden.
Maria LevkovetsSwedish NMR Centre, University of Gothenburg, Box 465, SE-40530, Gothenburg, Sweden.ORCID 0000-0002-1805-9057
Dmitry LesovoyShemyakin-Ovchinnikov Institute of Bioorganic Chemistry RAS, 117997, Moscow, Russia.
Daniel MalmodinSwedish NMR Centre, University of Gothenburg, Box 465, SE-40530, Gothenburg, Sweden.
Claudio MirabelloDept of Physics, Chemistry and Biology, Linköping University, 581 83, Linköping, Sweden.ORCID 0000-0001-7868-034X
Björn WallnerNational Bioinformatics Infrastructure Sweden, Science for Life Laboratory, Solna, Sweden.ORCID 0000-0002-3772-8279
Renhua SunScience for Life Laboratory, Department of Medicine, Solna, Karolinska Institute, SE-17165, Solna, Sweden.ORCID 0000-0002-8203-4946
Tatyana SandalovaScience for Life Laboratory, Department of Medicine, Solna, Karolinska Institute, SE-17165, Solna, Sweden.ORCID 0000-0002-7694-6420
Peter AgbackDepartment of Molecular Sciences, Swedish University of Agricultural Sciences, PO Box 7015, SE-750 07, Uppsala, Sweden.ORCID 0000-0003-2226-0746
Göran KarlssonDepartment of Chemistry and Molecular Biology, University of Gothenburg, Box 465, SE-40530, Gothenburg, Sweden.ORCID 0000-0002-1821-4715
Adnane AchourScience for Life Laboratory, Department of Medicine, Solna, Karolinska Institute, SE-17165, Solna, Sweden.ORCID 0000-0003-0432-710X
Tatiana Agback *Department of Molecular Sciences, Swedish University of Agricultural Sciences, PO Box 7015, SE-750 07, Uppsala, Sweden. tatiana.agback@slu.se.ORCID 0000-0003-1325-6024
Vladislav Orekhov *Department of Chemistry and Molecular Biology, University of Gothenburg, Box 465, SE-40530, Gothenburg, Sweden. vladislav.orekhov@nmr.gu.se.ORCID 0000-0002-7892-6896

Funding

TRD3 NMRbox: Bayesian AnalyticsP41GM111135 · NIGMS · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI HOCH, JEFFREY C · 2015 to 2024
$14.0M
Cancerfonden (Swedish Cancer Society) 21 1605 Pj 01 HNIGMS NIH HHS P41 GM111135Russian Science Foundation (RSF) 23-44-10021Stiftelsen för Strategisk Forskning (Swedish Foundation for Strategic Research) ITM17-0218Vetenskapsrådet (Swedish Research Council) 2018-02874Vetenskapsrådet (Swedish Research Council) 2019-03561
6 · The paper itself

Abstract

Mucosa-associated lymphoid tissue lymphoma-translocation protein 1 (MALT1) is an attractive target for the development of modulatory compounds in the treatment of lymphoma and other cancers. While the three-dimensional structure of MALT1 has been previously determined through X-ray analysis, its dynamic behaviour in solution has remained unexplored. We present here dynamic analyses of the apo MALT1 form along with the E549A mutation. This investigation used NMR

Indexed as

Molecular Dynamics SimulationMucosa-Associated Lymphoid Tissue Lymphoma Translocation 1 ProteinAllosteric RegulationHumansMagnetic Resonance SpectroscopyMutationNuclear Magnetic Resonance, BiomolecularProtein ConformationMALT1 protein, humanMucosa-Associated Lymphoid Tissue Lymphoma Translocation 1 Protein

Identifiers

PMID39014105
PMCPMC11252132

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.