ArticleScientific data2024
A chromosome-level genome assembly for the paramylon-producing microalga Euglena gracilis.
Article in Scientific data, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.
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Who cites it
11 citing papers in PubMed.
- Affordable CRISPR RNP-Based Genome Editing in Euglena gracilis.Current protocols · 2026Article
- Review
- Cryo-EM structure of a photosystem I supercomplex from Euglena gracilis containing pentameric LHCE and dimeric LHCII.Nature communications · 2026Article
- Acceleration and Light-Induced Changes in Cytosolic cAMP Concentration inBiomolecules · 2026Article
- Structure and energy transfer of a far-red-absorbing euglenophyte PSI-LhcE-LhcbM supercomplex.Nature communications · 2026Article
- Genetic dissection of nonconventional introns reveals codominant noncanonical splicing code inProceedings of the National Academy of Sciences of the United States of America · 2025Article
- Giant endogenous viral elements in the genome of the model protistJournal of virology · 2025Article
- Comprehensive genomic and transcriptomic analysis of inositol phosphate-metabolizing enzymes in Euglena gracilis.Planta · 2025Article
- Visualisation ofLife science alliance · 2025Article
- A chromosome-level genome assembly for the paramylon-producing microalga Euglena gracilis.Scientific data · 2024Article
- A Revised Understanding of Petalomonad Diversity (Petalomonadida; Euglenida) Enabled by a Cultivation Approach, With Five New Species and Two New Genera.The Journal of eukaryotic microbiologyArticle
Corrections and comments
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Authors and funding
22 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Euglena gracilis (E. gracilis), pivotal in the study of photosynthesis, endosymbiosis, and chloroplast development, is also an industrial microalga for paramylon production. Despite its importance, E. gracilis genome exploration faces challenges due to its intricate nature. In this study, we achieved a chromosome-level de novo assembly (2.37 Gb) using Illumina, PacBio, Bionano, and Hi-C data. The assembly exhibited a contig N50 of 619 Kb and scaffold N50 of 1.12 Mb, indicating superior continuity. Approximately 99.83% of the genome was anchored to 46 chromosomes, revealing structural insights. Repetitive elements constituted 58.84% of the sequences. Functional annotations were assigned to 39,362 proteins, enhancing interpretative power. BUSCO analysis confirmed assembly completeness at 80.39%. This first high-quality E. gracilis genome offers insights for genetics and genomics studies, overcoming previous limitations. The impact extends to academic and industrial research, providing a foundational resource.
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Registered trials
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