Evidence map›Paper›PMID 39012166›Full record

ArticleApplied and environmental microbiology2024

Evolutionary genomic analyses of canine

Kristina Ceres, Jordan D Zehr, Chloe Murrell, Jean K Millet, Qi Sun, Holly C McQueary, Alanna Horton, Casey Cazer, Kelly Sams, Guillaume Reboul and 18 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Applied and environmental microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors.

Kristina CeresCornell University, Ithaca, New York, USA.ORCID 0000-0002-6682-0031
Jordan D ZehrCornell University, Ithaca, New York, USA.ORCID 0000-0003-2099-4172
Chloe MurrellCornell University, Ithaca, New York, USA.
Jean K MilletUniversité Paris-Saclay, INRAE, UVSQ, Virologie et Immunologie Moléculaires, Jouy-en-Josas, Paris, France.
Qi SunCornell University, Ithaca, New York, USA.
Holly C McQuearyCornell University, Ithaca, New York, USA.
Alanna HortonCornell University, Ithaca, New York, USA.
Casey CazerCornell University, Ithaca, New York, USA.
Kelly SamsCornell University, Ithaca, New York, USA.
Guillaume ReboulCornell University, Ithaca, New York, USA.
William B AndreopoulosSan José State University, San José, California, USA.
Patrick K MitchellCornell University, Ithaca, New York, USA.
Renee AndersonCornell University, Ithaca, New York, USA.
Rebecca Franklin-GuildCornell University, Ithaca, New York, USA.
Brittany D CronkCornell University, Ithaca, New York, USA.
Bryce J StanhopeCornell University, Ithaca, New York, USA.
Claire R BurbickWashington Animal Disease Diagnostic Laboratory, Department of Veterinary Microbiology and Pathology, Washington State University, Pullman, Washington, USA.
Rebecca WolkingWashington Animal Disease Diagnostic Laboratory, Department of Veterinary Microbiology and Pathology, Washington State University, Pullman, Washington, USA.
Laura PeakLouisiana Animal Disease Diagnostic Laboratory, School of Veterinary Medicine, Louisiana State University, Baton Rouge, Louisiana, USA.
Yan ZhangOhio Department of Agriculture Animal Disease Diagnostic Laboratory, Reynoldsburg, Ohio, USA.
Rebeccah McDowallUniversity of Guelph, Animal Health Laboratory, Guelph, Ontario, Canada.
Aparna KrishnamurthyUniversity of Guelph, Animal Health Laboratory, Guelph, Ontario, Canada.
Durda SlavicUniversity of Guelph, Animal Health Laboratory, Guelph, Ontario, Canada.
Prabhjot Kaur SekhonSouth Dakota State University, Brookings, South Dakota, USA.
Gregory H TysonUS Food and Drug Administration, Veterinary Laboratory Investigation and Response Network, Laurel, Maryland, USA.ORCID 0000-0002-2729-5035
Olgica CericUS Food and Drug Administration, Veterinary Laboratory Investigation and Response Network, Laurel, Maryland, USA.
Michael J StanhopeCornell University, Ithaca, New York, USA.ORCID 0000-0002-4590-1529
Laura B GoodmanCornell University, Ithaca, New York, USA.ORCID 0000-0002-8327-3092

Funding

Assessment of Zoonotic Risk of Emerging Infections in Companion AnimalsU18FD006993 · FDA · CORNELL UNIVERSITY · PI GOODMAN, LAURA BRUNENGRABER, STANHOPE, MICHAEL J · 2020 to 2024
$984k
Validation of Antimicrobial Resistance Data Analysis and Quality Control Procedures for Whole Genome Sequencing Using Commensal E. coli from Multiple Animal SpeciesU18FD006453 · FDA · WASHINGTON STATE UNIVERSITY · PI Claire R Burbick · 2018 to 2026
$803k
Whole genome sequencing based tracking of pathogens in Animal Diagnostic SpecimensU18FD006558 · FDA · SOUTH DAKOTA STATE UNIVERSITY · PI Laura Ruesch · 2018 to 2026
$795k
Whole genome sequencing laboratory, procurement of supplies and reagents and equipment maintenance for surveillance, outbreak assessment, and data mining.U18FD006442 · FDA · LOUISIANA STATE UNIV A&M COL BATON ROUGE · PI ALMA ROY · 2018 to 2026
$707k
Genomic surveillance for antimicrobial resistance in animalsU18FD006716 · FDA · CORNELL UNIVERSITY · PI Laura Brunengraber Goodman · 2019 to 2026
$707k
Whole genome sequencing for outbreak investigations of foodborne pathogens and antimicrobial resistance studies for FDA Vet-LIRNU18FD006712 · FDA · OHIO STATE DEPARTMENT OF AGRICULTURE · PI Melanie Prarat · 2019 to 2026
$703k
Vet-LIRN antimicrobial resistance surveillance through collection of AMR data and whole genome sequencing of isolates from Canadian provincesU18FD007244 · FDA · UNIVERSITY OF GUELPH · PI Durda Slavic · 2020 to 2026
$625k
Enhancing Vet-LIRN antimicrobial resistance surveillance activity through collection of AMR data for 720 and whole genome sequencing (WGS) of 300 bacterial isolates from five Canadian provincesU18FD006862 · FDA · UNIVERSITY OF GUELPH · PI SLAVIC, DURDA · 2019 to 2019
$60k
FDA HHS U18 FD006180FDA HHS U18 FD006442FDA HHS U18 FD006453FDA HHS U18 FD006558FDA HHS U18 FD006712FDA HHS U18 FD006716FDA HHS U18 FD006862FDA HHS U18 FD006993FDA HHS U18 FD007244HHS | U.S. Food and Drug Administration (FDA) 1U18FD006442HHS | U.S. Food and Drug Administration (FDA) 1U18FD006453HHS | U.S. Food and Drug Administration (FDA) 1U18FD006558HHS | U.S. Food and Drug Administration (FDA) 1U18FD006712HHS | U.S. Food and Drug Administration (FDA) 1U18FD006862,1U18FD007244HHS | U.S. Food and Drug Administration (FDA) 1U18FD006993, 5U18FD006716
6 · The paper itself

Abstract

Infections caused by antimicrobial-resistant IMPORTANCE: Much of the human genomic epidemiology data available for

Indexed as

Anti-Bacterial AgentsDog DiseasesDrug Resistance, Multiple, BacterialEscherichia coliEscherichia coli InfectionsAnimalsBacterial CapsulesCanadaDogsEscherichia coli ProteinsEvolution, MolecularGenome, BacterialGenome-Wide Association StudyGenomicsMultigene FamilyUnited StatesAnti-Bacterial AgentsEscherichia coli Proteinsantibiotic resistance

Identifiers

PMID39012166
PMCPMC11337803

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.