Evidence map›Paper›PMID 39011147›Full record

ArticleFrontiers in microbiology2024

Interplay among manures, vegetable types, and tetracycline resistance genes in rhizosphere microbiome.

Izhar Ali, Beenish Naz, Ziyang Liu, Jingwei Chen, Zi Yang, Kotb Attia, Nasir Ayub, Ikram Ali, Arif Ahmed Mohammed, Shah Faisal and 3 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Frontiers in microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Izhar AliKey Laboratory of Cell Activities and Stress Adaptations Ministry of Education, School of Life Sciences, Lanzhou University, Lanzhou, Gansu, China.
Beenish NazKey Laboratory of Cell Activities and Stress Adaptations Ministry of Education, School of Life Sciences, Lanzhou University, Lanzhou, Gansu, China.
Ziyang LiuState Key Laboratory of Herbage Improvement and Grassland Agroecosystems, College of Ecology, Lanzhou University, Lanzhou, Gansu, China.
Jingwei ChenState Key Laboratory of Herbage Improvement and Grassland Agroecosystems, College of Ecology, Lanzhou University, Lanzhou, Gansu, China.
Zi YangKey Laboratory of Cell Activities and Stress Adaptations Ministry of Education, School of Life Sciences, Lanzhou University, Lanzhou, Gansu, China.
Kotb AttiaDepartment of Biochemistry, College of Science, King Saud University, Riyadh, Saudi Arabia.
Nasir AyubKorean Environmental Microorganism Resource Center, Department of Integrative Biotechnology, Sungkyuankwan University, Seoul, Republic of Korea.
Ikram AliCenter for Chinese Herbal Medicine Drug Development, Hong Kong Baptist University, Kowloon Tong, China.
Arif Ahmed MohammedDepartment of Biochemistry, College of Science, King Saud University, Riyadh, Saudi Arabia.
Shah FaisalDepartment of Environmental Engineering, School of Architecture and Civil Engineering, Chengdu University, Chengdu, China.
Likun SunCollege of Animal Sciences, Gansu Agricultural University, Lanzhou, Gansu, China.
Sa XiaoState Key Laboratory of Herbage Improvement and Grassland Agroecosystems, College of Ecology, Lanzhou University, Lanzhou, Gansu, China.
Shuyan ChenKey Laboratory of Cell Activities and Stress Adaptations Ministry of Education, School of Life Sciences, Lanzhou University, Lanzhou, Gansu, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The rapid global emergence of antibiotic resistance genes (ARGs) is a substantial public health concern. Livestock manure serves as a key reservoir for tetracycline resistance genes (TRGs), serving as a means of their transmission to soil and vegetables upon utilization as a fertilizer, consequently posing a risk to human health. The dynamics and transfer of TRGs among microorganisms in vegetables and fauna are being investigated. However, the impact of different vegetable species on acquisition of TRGs from various manure sources remains unclear. This study investigated the rhizospheres of three vegetables (carrots, tomatoes, and cucumbers) grown with chicken, sheep, and pig manure to assess TRGs and bacterial community compositions via qPCR and high-throughput sequencing techniques. Our findings revealed that tomatoes exhibited the highest accumulation of TRGs, followed by cucumbers and carrots. Pig manure resulted in the highest TRG levels, compared to chicken and sheep manure, in that order. Bacterial community analyses revealed distinct effects of manure sources and the selective behavior of individual vegetable species in shaping bacterial communities, explaining 12.2% of TRG variation. Firmicutes had a positive correlation with most TRGs and the

Indexed as

manure fertilizationmobile genetic elementsplant microbes interactionrhizosphererisk of exposuretetracycline resistance genes

Identifiers

PMID39011147
PMCPMC11246966

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.