Evidence map›Paper›PMID 39011114›Full record

ArticleResearch square2024

Harmonization of Longitudinal Diffusion Tensor Imaging Data of the Pediatric Cervical and Thoracic Spinal Cord at 3T Using Longitudinal ComBat.

Yutong Li, Devon M Middleton, Andrew Chen, Russell T Shinohara, Laura Krisa, Scott H Faro, Mary Jane Mulcahey, Feroze B Mohamed

Abstract readPreprint
In one paragraph

Article in Research square, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yutong LiThomas Jefferson University, Sidney Kimmel Medical College.
Devon M MiddletonThomas Jefferson University.
Andrew ChenUniversity of Pennsylvania Perelman School of Medicine.
Russell T ShinoharaUniversity of Pennsylvania Perelman School of Medicine.
Laura KrisaThomas Jefferson University.
Scott H FaroThomas Jefferson University.
Mary Jane MulcaheyThomas Jefferson University.
Feroze B MohamedThomas Jefferson University.

Funding

Harmonization of Multi-Site Neuroimaging Data from Complex Study DesignsR01MH123550 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI SHINOHARA, RUSSELL TAKESHI · 2020 to 2025
$4.0M
Neuroimaging based on DTI as a biomarker for spinal cord injury in children.R01NS079635 · NINDS · THOMAS JEFFERSON UNIVERSITY · PI MOHAMED, FEROZE B, MULCAHEY-HERSHEY, MARYJANE · 2013 to 2017
$1.7M
NIMH NIH HHS R01 MH123550NINDS NIH HHS R01 NS079635
6 · The paper itself

Abstract

Diffusion tensor imaging (DTI) of the spinal cord has been extensively used to identify biomarkers for spinal cord pathology. Previously, the longitudinal ComBat (longComBat) technique was examined to reduce scanner effects in multi-site, multi-scanner spinal cord DTI data. This study aimed to assess its effectiveness on longitudinal scans using a single-scanner pediatric dataset, including healthy and spinal cord injury (SCI) subjects. Two identical datasets were collected from 42 healthy and 27 SCI subjects with a 2-hour interval between scans on a 3T Siemens MRI scanner. Axial DTI images of the entire cervical and thoracic spinal cord were obtained, and various average diffusion tensor metrics (FA, MD, RD, & AD) were measured at each vertebral level. Pearson correlation and intraclass correlation coefficients were used to evaluate inter- and intra-subject agreement pre- and post-harmonization. Minimal improvement in agreement was observed with the mean square residual (MSR) model, while the restricted maximum likelihood estimator (REML) model showed reduced intra-subject agreement in all the tensor metrics. The significant variability between longitudinal DTI scans within a single scanner was likely due to physiological motion rather than scanner effects. Post-harmonization using the longComBat MSR model showed limited improvement in agreement.

Indexed as

Diffusion tensor imagingHarmonizationLongitudinal ComBatLongitudinal scansScanner effectsspinal cord injury

Identifiers

PMID39011114
PMCPMC11247925

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.