Evidence map›Paper›PMID 39010681›Full record

ArticleJournal of neurochemistry2024

Cryo-EM structure of the dopamine transporter with a novel atypical non-competitive inhibitor bound to the orthosteric site.

Clara Nautrup Pedersen, Fuyu Yang, Samantha Ita, Yibin Xu, Ravikumar Akunuri, Sofia Trampari, Caroline Marie Teresa Neumann, Lasse Messell Desdorf, Birgit Schiøtt, Joseph M Salvino and 3 more

Abstract read
In one paragraph

Article in Journal of neurochemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Clara Nautrup PedersenDANDRITE, Nordic EMBL Partnership for Molecular Medicine, Department of Molecular Biology and Genetics, Aarhus University, Aarhus, Denmark.ORCID 0009-0007-9294-7718
Fuyu YangDepartment of Pharmacology and Physiology, Drexel University College of Medicine, Philadelphia, Pennsylvania, USA.
Samantha ItaDepartment of Pharmacology and Physiology, Drexel University College of Medicine, Philadelphia, Pennsylvania, USA.
Yibin XuDepartment of Pharmacology and Physiology, Drexel University College of Medicine, Philadelphia, Pennsylvania, USA.
Ravikumar AkunuriThe Wistar Institute, Philadelphia, Pennsylvania, USA.
Sofia TrampariDANDRITE, Nordic EMBL Partnership for Molecular Medicine, Department of Molecular Biology and Genetics, Aarhus University, Aarhus, Denmark.
Caroline Marie Teresa NeumannDANDRITE, Nordic EMBL Partnership for Molecular Medicine, Department of Molecular Biology and Genetics, Aarhus University, Aarhus, Denmark.
Lasse Messell DesdorfDepartment of Chemistry, Aarhus University, Aarhus, Denmark.ORCID 0009-0004-3290-3869
Birgit SchiøttDepartment of Chemistry, Aarhus University, Aarhus, Denmark.
Joseph M SalvinoThe Wistar Institute, Philadelphia, Pennsylvania, USA.
Ole Valente MortensenDepartment of Pharmacology and Physiology, Drexel University College of Medicine, Philadelphia, Pennsylvania, USA.ORCID 0000-0002-3487-8239
Poul NissenDANDRITE, Nordic EMBL Partnership for Molecular Medicine, Department of Molecular Biology and Genetics, Aarhus University, Aarhus, Denmark.ORCID 0000-0003-0948-6628
Azadeh ShahsavarDANDRITE, Nordic EMBL Partnership for Molecular Medicine, Department of Molecular Biology and Genetics, Aarhus University, Aarhus, Denmark.ORCID 0000-0001-5405-597X

Funding

Tumor Microenvironment and MetastasisP30CA010815 · NCI · WISTAR INSTITUTE · PI Luis J Montaner · 1985 to 2026
$75.9M
Non-beta-lactam GLT-1 activators: characterization in preclinical models of opioid and cocaine addictionR01DA051205 · NIDA · TEMPLE UNIV OF THE COMMONWEALTH · PI RAWLS, SCOTT M., REITZ, ALLEN B · 2020 to 2024
$2.1M
Computational and functional studies of allosteric monoamine transporter modulationR01MH106912 · NIMH · DREXEL UNIVERSITY · PI KORTAGERE, SANDHYA, MORTENSEN, OLE VALENTE · 2015 to 2019
$2.0M
Allosteric modulation of dopamine transport-Functional and Biochemical StudiesR56MH121453 · NIMH · DREXEL UNIVERSITY · PI MORTENSEN, OLE VALENTE · 2020 to 2021
$783k
Purchase of an Echo 650 acoustic liquid handler with Access workstationS10OD030245 · OD · WISTAR INSTITUTE · PI SALVINO, JOSEPH M · 2021 to 2021
$567k
Aarhus Universitets Forskningsfond AUFF-E-2022-9-24Danish Ministry for Research and Higher Education 5072-00025BLundbeck Foundation R310-2018-3713Lundbeck Foundation R368-2021-522NCI NIH HHS P30 CA010815NIDA NIH HHS R01 DA051205NIH HHS MH106912NIH HHS MH121453NIH HHS P30 CA010815-53NIH HHS R01 DA051205-03NIH HHS S10 OD030245NIH HHS S10OD030245-01NIMH NIH HHS R01 MH106912NIMH NIH HHS R56 MH121453Novo Nordisk Fonden NNF18OC0032608Novo Nordisk Fonden NNF19OC0054875
6 · The paper itself

Abstract

The regulation of dopamine (DA) removal from the synaptic cleft is a crucial process in neurotransmission and is facilitated by the sodium- and chloride-coupled dopamine transporter DAT. Psychostimulant drugs, cocaine, and amphetamine, both block the uptake of DA, while amphetamine also triggers the release of DA. As a result, they prolong or even amplify neurotransmitter signaling. Atypical inhibitors of DAT lack cocaine-like rewarding effects and offer a promising strategy for the treatment of drug use disorders. Here, we present the 3.2 Å resolution cryo-electron microscopy structure of the Drosophila melanogaster dopamine transporter (dDAT) in complex with the atypical non-competitive inhibitor AC-4-248. The inhibitor partially binds at the central binding site, extending into the extracellular vestibule, and locks the transporter in an outward open conformation. Our findings propose mechanisms for the non-competitive inhibition of DAT and attenuation of cocaine potency by AC-4-248 and provide a basis for the rational design of more efficacious atypical inhibitors.

Indexed as

Cryoelectron MicroscopyDopamine Plasma Membrane Transport ProteinsDrosophila melanogasterAnimalsBinding SitesCocaineDopamine Uptake InhibitorsDrosophila ProteinsCocaineDAT protein, DrosophilaDopamine Plasma Membrane Transport ProteinsDopamine Uptake InhibitorsDrosophila Proteinsatypical inhibitorcryo‐electron microscopydopamine transporterneurotransmitter transporter

Identifiers

PMID39010681
PMCPMC11449642

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.