Evidence map›Paper›PMID 39008184›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2024

Purification of Planarian Stem Cells Using a Draq5-Based FACS Approach.

Kuang-Tse Wang, Justin Tapper, Carolyn E Adler

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Identification and characterization of planarian multinucleated cells inFrontiers in cell and developmental biology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Kuang-Tse WangDepartment of Molecular Medicine, Cornell University, College of Veterinary Medicine, Ithaca, NY, USA.
Justin TapperDepartment of Molecular Medicine, Cornell University, College of Veterinary Medicine, Ithaca, NY, USA.
Carolyn E AdlerDepartment of Molecular Medicine, Cornell University, College of Veterinary Medicine, Ithaca, NY, USA. cea88@cornell.edu.

Funding

Mechanisms driving stem cell responses to injury in planariansR01GM139933 · NIGMS · CORNELL UNIVERSITY · PI ADLER, CAROLYN ELIZABETH · 2020 to 2024
$2.2M
NIGMS NIH HHS R01 GM139933
6 · The paper itself

Abstract

Planarians are flatworms that have the remarkable ability to regenerate entirely new animals. This regenerative ability requires abundant adult stem cells called neoblasts, which are relatively small in size, sensitive to irradiation and the only proliferative cells in the animal. Despite the lack of cell surface markers, fluorescence-activated cell sorting (FACS) protocols have been developed to discriminate and isolate neoblasts, based on DNA content. Here, we describe a protocol that combines staining of far-red DNA dye Draq5, Calcein-AM and DAPI, along with a shortened processing time. This profiling strategy can be used to functionally characterize the neoblast population in pharmacologically-treated or gene knockdown animals. Highly purified neoblasts can be analyzed with downstream assays, such as in situ hybridization and RNA sequencing.

Indexed as

Flow CytometryPlanariansStem CellsAnimalsCell SeparationFluorescent DyesRegenerationFluorescent DyesFlatwormsFluorescence-activated cell sortingRegeneration

Identifiers

PMID39008184
PMCPMC12817892

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.