ArticlePeerJ2024
Integrative analysis of the transcriptome and metabolome provides insights into polysaccharide accumulation in
Article in PeerJ, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.
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Who cites it
6 citing papers in PubMed.
- Comparative RNA-Seq and Phytochemical Profiling Reveal Year-Dependent Bioactive Variations and Delineate Key Metabolic Pathways inInternational journal of molecular sciences · 2026Article
- Transcriptomic and Metabolomic Insights into Tissue- and Cultivar-Dependent Polysaccharide Accumulation inInternational journal of molecular sciences · 2026Article
- Integration of metabolomics and proteomics reveals the mechanisms of seasonal accumulation and key regulatory networks of polysaccharides in Polygonatum odoratum.BMC plant biology · 2026Article
- Integrated Metabolomic and Transcriptomic Analysis of Polysaccharide Biosynthesis inMolecules (Basel, Switzerland) · 2026Article
- Exploring phytochemical variability in Iranian Acanthophyllum (Caryophyllaceae) species: insights for enhanced medicinal and industrial utilization.BMC plant biology · 2026Article
- Characteristic Analysis of Metabolic Profiles ofMetabolites · 2025Article
Corrections and comments
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Authors and funding
7 authors.
Funding
Abstract
Background: Methods: To better understand the regulatory mechanisms of polysaccharide accumulation in Results: A total of 14,194 differentially expressed genes (DEGs) were identified, of which 6,689 DEGs were down-regulated in 'Y10' compared with those in 'Y11'. KEGG enrichment analysis of the down-regulated DEGs revealed a significant enrichment of 'starch and sucrose metabolism', and 'amino sugar and nucleotide sugar metabolism'. Meanwhile, 80 differentially accumulated metabolites (DAMs) were detected, of which 52 were significantly up-regulated in 'Y11' compared to those in 'Y10'. The up-regulated DAMs were significantly enriched in 'tropane, piperidine and pyridine alkaloid biosynthesis', 'pentose phosphate pathway' and 'ABC transporters'. The integrated metabolomic and transcriptomic analysis have revealed that four DAMs, glucose, beta-D-fructose 6-phosphate, maltose and 3-beta-D-galactosyl-sn-glycerol were significantly enriched for polysaccharide accumulation, which may be regulated by 17 DEGs, including UTP-glucose-1-phosphate uridylyltransferase (
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