Evidence map›Paper›PMID 39006015›Full record

ArticlePeerJ2024

Innovative infrastructure to access Brazilian fungal diversity using deep learning.

Thiago Chaves, Joicymara Santos Xavier, Alfeu Gonçalves Dos Santos, Kelmer Martins-Cunha, Fernanda Karstedt, Thiago Kossmann, Susanne Sourell, Eloisa Leopoldo, Miriam Nathalie Fortuna Ferreira, Roger Farias and 8 more

Abstract read
In one paragraph

Article in PeerJ, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Thiago ChavesBrazilian National Institute for Digital Convergence-INCoD, Universidade Federal de Santa Catarina, Florianópolis, Santa Catarina, Brazil.ORCID 0000-0002-1737-8806
Joicymara Santos XavierInstitute of Agricultural Science, Universidade Federal dos Vales do Jequitinhonha e Mucuri, Unaí, Minas Gerais, Brazil.ORCID 0000-0002-4649-6270
Alfeu Gonçalves Dos SantosBrazilian National Institute for Digital Convergence-INCoD, Universidade Federal de Santa Catarina, Florianópolis, Santa Catarina, Brazil.
Kelmer Martins-CunhaMIND.Funga/MICOLAB, Department of Botany, Universidade Federal de Santa Catarina, Florianópolis, Santa Catarina, Brazil.ORCID 0000-0002-0545-5966
Fernanda KarstedtMIND.Funga/MICOLAB, Department of Botany, Universidade Federal de Santa Catarina, Florianópolis, Santa Catarina, Brazil.
Thiago KossmannMIND.Funga/MICOLAB, Department of Botany, Universidade Federal de Santa Catarina, Florianópolis, Santa Catarina, Brazil.
Susanne SourellMIND.Funga/MICOLAB, Department of Botany, Universidade Federal de Santa Catarina, Florianópolis, Santa Catarina, Brazil.
Eloisa LeopoldoMIND.Funga/MICOLAB, Department of Botany, Universidade Federal de Santa Catarina, Florianópolis, Santa Catarina, Brazil.ORCID 0000-0002-6060-7731
Miriam Nathalie Fortuna FerreiraBrazilian National Institute for Digital Convergence-INCoD, Universidade Federal de Santa Catarina, Florianópolis, Santa Catarina, Brazil.
Roger FariasBrazilian National Institute for Digital Convergence-INCoD, Universidade Federal de Santa Catarina, Florianópolis, Santa Catarina, Brazil.
Mahatmã TittonMIND.Funga/MICOLAB, Department of Botany, Universidade Federal de Santa Catarina, Florianópolis, Santa Catarina, Brazil.ORCID 0000-0001-7139-5116
Genivaldo Alves-SilvaMIND.Funga/MICOLAB, Department of Botany, Universidade Federal de Santa Catarina, Florianópolis, Santa Catarina, Brazil.ORCID 0000-0002-8142-6665
Felipe BittencourtMIND.Funga/MICOLAB, Department of Botany, Universidade Federal de Santa Catarina, Florianópolis, Santa Catarina, Brazil.
Dener BortoliniDepartment of Microbiology, Institute of Biological Sciences, Universidade Federal de Minas Gerais (UFMG), Belo Horizonte, Minas Gerais, Brazil.
Emerson L GumboskiDepartment of Biological Sciences, Regional University of Joinville (UNIVILLE), Joinville, Santa Catarina, Brazil.ORCID 0000-0002-1237-2050
Aldo von WangenheimBrazilian National Institute for Digital Convergence-INCoD, Universidade Federal de Santa Catarina, Florianópolis, Santa Catarina, Brazil.ORCID 0000-0003-4532-1417
Aristóteles Góes-NetoDepartment of Microbiology, Institute of Biological Sciences, Universidade Federal de Minas Gerais (UFMG), Belo Horizonte, Minas Gerais, Brazil.ORCID 0000-0002-7692-6243
Elisandro Ricardo Drechsler-SantosMIND.Funga/MICOLAB, Department of Botany, Universidade Federal de Santa Catarina, Florianópolis, Santa Catarina, Brazil.

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico.Coordenação de Aperfeiçoamento Pessoal de Nível Superior (CAPES)The Mohamed bin Zayed Species Conservation Fund (MBZ)
6 · The paper itself

Abstract

In the present investigation, we employ a novel and meticulously structured database assembled by experts, encompassing macrofungi field-collected in Brazil, featuring upwards of 13,894 photographs representing 505 distinct species. The purpose of utilizing this database is twofold: firstly, to furnish training and validation for convolutional neural networks (CNNs) with the capacity for autonomous identification of macrofungal species; secondly, to develop a sophisticated mobile application replete with an advanced user interface. This interface is specifically crafted to acquire images, and, utilizing the image recognition capabilities afforded by the trained CNN, proffer potential identifications for the macrofungal species depicted therein. Such technological advancements democratize access to the Brazilian Funga, thereby enhancing public engagement and knowledge dissemination, and also facilitating contributions from the populace to the expanding body of knowledge concerning the conservation of macrofungal species of Brazil.

Indexed as

Deep LearningFungiBiodiversityBrazilDatabases, FactualNeural Networks, ComputerCNNComputer visionDeep learningFungiImage classification

Identifiers

PMID39006015
PMCPMC11243970

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.